Information on SUBCLASS 6.44.1 |
Subclass Accession number: 3384
Subclass: 6.44.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 10.0 +/- 10.8 Average RMSD (Å) : 0.850 +/- 0.129 Consensus geometry
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Consensus Sequence: | hXXXhXpchp |
(φψ)-conformation: | bpaaabapaa |
Pattern: | [FKTV] | [APV] | x | [FIY] | [AN] | x | [AEFK] | x | x | [DRS] | [DNS] | [FIW] | [HRST] | x | [IL] | x | x | x | x | [AEK] |
Conservation: | -0.786 | 0.209 | -0.383 | 1.183 | 0.664 | -0.417 | -0.786 | -0.651 | -0.786 | 0.237 | 1.875 | 0.630 | 0.020 | -0.517 | 2.563 | -1.256 | -1.189 | -0.450 | -0.584 | 0.423 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ay7_B_2 | 1ay7 | B | 2 | 21 | KAVINGEQIRSISDLHQTLK | EEEEEGGG--SHHHHHHHHH | pbbbxaaababaaaaaaaaa |
1fnn_A_74 | 1fnn | A | 75 | 94 | FVYINGFIYRNFTAIIGEIA | EEEEETTT--SHHHHHHHHH | xbxbxaaababaaaaaaaaa |
1knw_A_48 | 1knw | A | 48 | 67 | VVRFAQKACSNIHILRLMRE | EEEEEGGG---HHHHHHHHH | bbbxxaaabapaaaaaaaaa |
2tod_A_62 | 2tod | A | 63 | 82 | TPFYAVACNDDWRVLGTLAA | EEEEEGGG---HHHHHHHHH | xwbpxaaabapaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fnn_A_74 | 1fnn | A | MGMAGNESIUM ION | Y - 77 |
1knw_A_48 | 1knw | A | PLPPYRIDOXAL-5'-PHOSPHATE | A - 52 |
1knw_A_48 | 1knw | A | PLPPYRIDOXAL-5'-PHOSPHATE | K - 54 |
1knw_A_48 | 1knw | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | K - 54 |
1knw_A_48 | 1knw | A | PLPPYRIDOXAL-5'-PHOSPHATE | A - 55 |
2tod_A_62 | 2tod | A | PLPPYRIDOXAL-5'-PHOSPHATE | A - 67 |
2tod_A_62 | 2tod | A | DMOALPHA-DIFLUOROMETHYLORNITHINE | A - 67 |
2tod_A_62 | 2tod | A | DMOALPHA-DIFLUOROMETHYLORNITHINE | A - 69 |
2tod_A_62 | 2tod | A | PLPPYRIDOXAL-5'-PHOSPHATE | C - 70 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
2tod_A_62 | 2tod | A | CAACATALYTIC SITE | A - 69 |
Clusters included in this Subclass |
CLUSTER: EH.5.349 |
CLUSTER: EH.6.333 |