ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 6.63.1

Subclass Accession number: 3403
Subclass: 6.63.1

Type: EH beta-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 3.5 (>75 %)  3.5.1 (>75 %)  3.5.1.1
GO : GO:0004067 (>75 %)  GO:0016810 (>75 %)  GO:0016811 (>75 %)
SCOP : 53773 (>75 %)  53774 (>75 %)  53775 (>75 %)

Number of loops: 3

Average sequence ID (%) : 45.6 +/- 10.0
Average RMSD (Å) : 0.367 +/- 0.058

Consensus geometry

d (Å): 17

delta (°): 90-135

theta (°): 135-180

rho (°): 180-225

Consensus Sequence:	phhSpphpcc
(φψ)-conformation:	bbpaaapbaa

Pattern:	[N]	[V]	[KR]	[G]	[E]	[Q]	[FV]	x	[NQ]	[IM]	[AG]	[S]	[EQ]	[DNS]	[IM]	[NT]	[DGN]	[DN]	[DV]	[LVW]	[L]	[KT]	[L]	[AGS]	[KQ]	[KR]	[IV]	[AN]	[ET]	x
Conservation:	2.134	0.704	0.402	2.134	1.419	1.419	-0.771	-1.441	-0.006	-0.202	-0.440	0.704	0.382	-0.567	-0.043	-0.189	-0.726	0.407	-1.455	-1.282	0.704	-0.654	0.704	-0.885	0.077	0.382	0.358	-0.791	-0.654	-1.821

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1nns_A_47	1nns	A	47	76	NVKGEQVVNIGSQDMNDNVWLTLAKKINTD	EEEEEEEEEE-GGG--HHHHHHHHHHHHHH	xxbbbxabbbxaaapbaaaaaaaaaaaaaa
1o7j_A_51	1o7j	A	51	80	NVKGEQFSNMASENMTGDVVLKLSQRVNEL	EEEEEEEEEE-GGG--HHHHHHHHHHHHHH	xbbxbxabbbxaaaxbaaaaaaaaaaaaaa
4pga_A_56	4pga	A	56	85	NVRGEQVMQIASESITNDDLLKLGKRVAEL	EEEEEEEEEE-GGG--HHHHHHHHHHHHHH	xbbbbxabbbxaaaxbaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1o7j_A_51	1o7j	A	AC2SO4 BINDING SITE FOR CHAIN A	M - 60
1o7j_A_51	1o7j	A	AC2SO4 BINDING SITE FOR CHAIN A	A - 61
1o7j_A_51	1o7j	A	AC2SO4 BINDING SITE FOR CHAIN A	N - 64
1o7j_A_51	1o7j	A	AC3GOL BINDING SITE FOR CHAIN A	D - 68

Clusters included in this Subclass