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Information on SUBCLASS 6.68.1
Subclass Accession number: 3408
Subclass: 6.68.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.12 (>50 %)  
GO : GO:0003954 (>75 %)  GO:0005386 (>75 %)  GO:0005489 (>75 %)  GO:0005506 (>75 %)  GO:0008137 (>75 %)  GO:0008324 (>75 %)  GO:0008901 (>75 %)  GO:0015075 (>75 %)  GO:0015077 (>75 %)  GO:0015078 (>75 %)  GO:0015081 (>75 %)  GO:0015399 (>75 %)  GO:0016651 (>75 %)  GO:0016655 (>75 %)  GO:0016695 (>75 %)  GO:0016699 (>75 %)  GO:0046873 (>75 %)  GO:0046914 (>75 %)  GO:0050136 (>75 %)  
SCOP : 56769 (>75 %)  56770 (>75 %)  56771 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 61.9 +/- -9.4
Average RMSD (Å) : 0.233 +/- 0.115

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: NhhGCPPpPX
(φψ)-conformation: bbpebwppaa
Pattern: [IV][N][IV][AP][G][C][P][P][HN][P]x[NW][LM][V][G][T][IL][V][AY][AFY][LW]
Conservation:-0.3140.793-0.315-0.7650.7932.1281.2381.238-0.1331.238-1.826-0.978-0.392-0.0960.7930.349-0.533-0.096-1.155-1.134-0.835
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cc1_S_1581cc1   S159179VNVPGCPPHPDWMVGTLVAAWEEE--SS--HHHHHHHHHHHHbbbxebwxxaaaaaaaaaaaa
1e3d_A_1451e3d   A145165INVPGCPPNPLNMVGTLVAFLEEE-SSS--HHHHHHHHHHHHxxbxebwxxaaaaaaaaaaaa
1ubl_S_1451ubl   S145165INIAGCPPNPYNLVGTIVYYLEEE-SSS--HHHHHHHHHHHHxbbxebwxxaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cc1_S_1581cc1   S     FE2FE (II) ION G - 163
1cc1_S_1581cc1   S     FS4IRON/SULFUR CLUSTER G - 163
1cc1_S_1581cc1   S     FE2FE (II) ION C - 164
1cc1_S_1581cc1   S     FS4IRON/SULFUR CLUSTER C - 164
1cc1_S_1581cc1   S     FS4IRON/SULFUR CLUSTER P - 165
1cc1_S_1581cc1   S     FS4IRON/SULFUR CLUSTER P - 166
1cc1_S_1581cc1   S     FS4IRON/SULFUR CLUSTER W - 170
1e3d_A_1451e3d   A     FSXBIS-(MU-2-OXO),[(MU-3--SULFIDO)-BIS(MU-2--SULFIDO)-TRIS(CYS-S)-TRI-IRON] (AQUA)(GLU-O)IRON(II) P - 148
1e3d_A_1451e3d   A     FS3FE3-S4 CLUSTER G - 149
1e3d_A_1451e3d   A     FSXBIS-(MU-2-OXO),[(MU-3--SULFIDO)-BIS(MU-2--SULFIDO)-TRIS(CYS-S)-TRI-IRON] (AQUA)(GLU-O)IRON(II) G - 149
1e3d_A_1451e3d   A     FS3FE3-S4 CLUSTER C - 150
1e3d_A_1451e3d   A     FSXBIS-(MU-2-OXO),[(MU-3--SULFIDO)-BIS(MU-2--SULFIDO)-TRIS(CYS-S)-TRI-IRON] (AQUA)(GLU-O)IRON(II) C - 150
1e3d_A_1451e3d   A     FS3FE3-S4 CLUSTER P - 151
1e3d_A_1451e3d   A     FSXBIS-(MU-2-OXO),[(MU-3--SULFIDO)-BIS(MU-2--SULFIDO)-TRIS(CYS-S)-TRI-IRON] (AQUA)(GLU-O)IRON(II) P - 151
1e3d_A_1451e3d   A     FSXBIS-(MU-2-OXO),[(MU-3--SULFIDO)-BIS(MU-2--SULFIDO)-TRIS(CYS-S)-TRI-IRON] (AQUA)(GLU-O)IRON(II) P - 152
1ubl_S_1451ubl   S     MPD2-METHYL-2,4-PENTANEDIOL N - 146
1ubl_S_1451ubl   S     FS4IRON/SULFUR CLUSTER G - 149
1ubl_S_1451ubl   S     FS4IRON/SULFUR CLUSTER C - 150
1ubl_S_1451ubl   S     FS4IRON/SULFUR CLUSTER P - 151
1ubl_S_1451ubl   S     FS4IRON/SULFUR CLUSTER P - 152
1ubl_S_1451ubl   S     MPD2-METHYL-2,4-PENTANEDIOL Y - 164
1ubl_S_1451ubl   S     MPD2-METHYL-2,4-PENTANEDIOL L - 165
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e3d_A_1451e3d   A FE1THIS CLUSTER IS PRODUCED FROM AN FE4-S4 POSSIBLY RESULTS FROM LOSS OF S IN CONVERSION OF FE4-S4 CLUSTER TO FE4-S3-O3.C - 150

Clusters included in this Subclass
CLUSTER: EH.5.314