Information on SUBCLASS 4.47.1 |
Subclass Accession number: 341
Subclass: 4.47.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.2 (>75 %) 3.2.1 (>75 %) GO : GO:0003677 (>50 %) SCOP : 53270 (>75 %) 53271 (>75 %) 53272 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 9.3 +/- 12.2 Average RMSD (Å) : 1.200 +/- 0.265 Consensus geometry
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Consensus Sequence: | XXXcXXhX |
(φψ)-conformation: | aallppbb |
Pattern: | [ADV] | [NQT] | [AD] | x | [IKT] | [AT] | [LVW] | [DEY] | [AE] | [AGR] | [CRS] | [GT] | [GN] | x | x | [ALV] | x | [FLV] |
Conservation: | -1.009 | 0.353 | 0.330 | -1.146 | -1.009 | 1.273 | -0.056 | 0.081 | 0.717 | -0.328 | -0.464 | 1.253 | 2.465 | -1.146 | -0.464 | 0.081 | -1.282 | 0.353 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1jye_A_130 | 1jye | A | 130 | 147 | DQDAIAVEAACTNVPALF | HHHHHHHHHHTTTS-EEE | aaaaaaaaaaalvxpbbb |
1tca_*_76 | 1tca | - | 84 | 101 | VNAITALYAGSGNNKLPV | HHHHHHHHHHTTS--EEE | aaaaaaaaaaavlbxbxb |
1unn_C_309 | 1unn | C | 314 | 331 | ATARKTWDERRGGRGVRL | HHHHHHHHHH-TT--EEE | aaaaaaaaaaavvxxbab |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1tca_*_76 | 1tca | * | NAGN-ACETYL-D-GLUCOSAMINE | Q - 77 |
1tca_*_76 | 1tca | * | NAGN-ACETYL-D-GLUCOSAMINE | V - 78 |
1tca_*_76 | 1tca | * | NAGN-ACETYL-D-GLUCOSAMINE | N - 79 |
1tca_*_76 | 1tca | * | NAGN-ACETYL-D-GLUCOSAMINE | Y - 82 |
Clusters included in this Subclass |
CLUSTER: HE.4.195 |