ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 7.21.1

Subclass Accession number: 3441
Subclass: 7.21.1

Type: EH beta-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Number of loops: 4

Average sequence ID (%) : 37.3 +/- 21.7
Average RMSD (Å) : 0.300 +/- 0.000

Consensus geometry

d (Å): 15

delta (°): 45-90

theta (°): 135-180

rho (°): 315-360

Consensus Sequence:	VIhEXhhhcpp
(φψ)-conformation:	bpalaaabpaa

Pattern:	[V]	[HLV]	[K]	[V]	[I]	[ILV]	[E]	[AT]	[CGP]	[LY]	[FLW]	[DNS]	[DEPT]	[EK]	[ET]	[IKL]	x	x	[AL]	[ACV]	x	x	[ACS]	x	x
Conservation:	1.303	-0.919	1.995	1.303	1.303	0.343	1.995	0.410	-0.827	0.742	-0.232	0.192	-0.730	0.785	0.180	-0.835	-1.249	-1.119	-0.422	-0.395	-0.589	-0.899	-0.223	-1.189	-0.923

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1mzh_A_219	1mzh	A	219	243	VHKVIVETPYLNEEEIKKAVEICIE	EEEEE--GGG--HHHHHHHHHHHHH	xbbbxalaaabxaaaaaaaaaaaaa
1n7k_A_136	1n7k	A	136	160	VVKVILEAPLWDDKTLSLLVDSSRR	EEEEE--GGGS-HHHHHHHHHHHHH	xbbxxalaaabxaaaaaaaaaaaaa
1o0y_A_148	1o0y	A	148	172	VVKVIIETCYLDTEEKIAACVISKL	EEEEE--GGG--HHHHHHHHHHHHH	xbbbxalaaabxaaaaaaaaaaaaa
1ub3_A_120	1ub3	A	120	144	VLKVILETGYFSPEEIARLAEAAIR	EEEEE--GGGS-HHHHHHHHHHHHH	xbbbxalaaabxaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1ub3_A_120	1ub3	A	HPD1-HYDROXY-PENTANE-3,4-DIOL-5-PHOSPHATE	I - 124

Clusters included in this Subclass