Logo
Information on SUBCLASS 7.26.1
Subclass Accession number: 3446
Subclass: 7.26.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 54.0 +/- 17.6
Average RMSD (Å) : 0.300 +/- 0.082

Consensus geometry
d (Å): 17 delta (°): 0-45 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: GXKXDLRpDXp
(φψ)-conformation: pblaaaaapaa
Pattern: [FIM][IL][L][V][G][CNT][KQ]x[D][L][R][DNT][D]x[DHS][T]xx[EK][L][AKS]
Conservation:-0.598-0.0110.5110.5111.553-0.8590.098-1.4771.5530.5111.032-0.5571.553-1.347-0.8091.032-1.130-1.264-0.0080.511-0.805
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ds6_A_1101ds6   A110130IILVGTKLDLRDDKDTIEKLKEEEEEE-GGGTT-HHHHHHHHbbxbxxlaaaaaxaaaaaaaa
1kmq_A_1121kmq   A112132IILVGNKKDLRNDEHTRRELAEEEEEE-GGGTT-HHHHHHHHbbxbxxvaaaaaxaaaaaaaa
1m7b_A_1291m7b   A130150MLLVGCKSDLRTDVSTLVELSEEEEEE-GGGGG-HHHHHHHHbbxbxbvaaaaaxaaaaaaaa
2ngr_A_1102ngr   A110130FLLVGTQIDLRDDPSTIEKLAEEEEEE-GGGGG-HHHHHHHHbbxbxblaaaaaxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ds6_A_1101ds6   A     GDPGUANOSINE-5'-DIPHOSPHATE T - 115
1ds6_A_1101ds6   A     GDPGUANOSINE-5'-DIPHOSPHATE K - 116
1ds6_A_1101ds6   A     GDPGUANOSINE-5'-DIPHOSPHATE L - 117
1ds6_A_1101ds6   A     GDPGUANOSINE-5'-DIPHOSPHATE D - 118
1ds6_A_1101ds6   A     GDPGUANOSINE-5'-DIPHOSPHATE L - 119
1kmq_A_1121kmq   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER N - 117
1kmq_A_1121kmq   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER K - 118
1kmq_A_1121kmq   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER K - 119
1kmq_A_1121kmq   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER D - 120
1kmq_A_1121kmq   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER L - 121
1m7b_A_1291m7b   A     GTPGUANOSINE-5'-TRIPHOSPHATE C - 135
1m7b_A_1291m7b   A     GTPGUANOSINE-5'-TRIPHOSPHATE K - 136
1m7b_A_1291m7b   A     GTPGUANOSINE-5'-TRIPHOSPHATE S - 137
1m7b_A_1291m7b   A     GTPGUANOSINE-5'-TRIPHOSPHATE D - 138
1m7b_A_1291m7b   A     GTPGUANOSINE-5'-TRIPHOSPHATE L - 139
2ngr_A_1102ngr   A     GDPGUANOSINE-5'-DIPHOSPHATE Q - 116
2ngr_A_1102ngr   A     GDPGUANOSINE-5'-DIPHOSPHATE I - 117

Clusters included in this Subclass
CLUSTER: EH.6.156