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Information on SUBCLASS 4.52.1
Subclass Accession number: 346
Subclass: 4.52.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 7.1 +/- 0.0
Average RMSD (Å) : 0.900 +/- 0.000

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 45-90 rho (°): 45-90
Consensus Sequence: XXXXphXh
(φψ)-conformation: aababpbb
Pattern: x[EK][EM][AW][L][AT]xx[DP][DH][FY][PS][IV]x
Conservation:-1.2070.445-0.794-0.1751.270-0.175-1.413-1.2070.2380.4451.889-0.1750.857-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dz4_A_3601dz4   A371383LKEWLTRIPDFSI.HHHHHHH----EE.aaaaaaababbbx.
2dnj_A_2432dnj   A243256NEMALAISDHYPVEHHHHHHH-SB--EEaaaaaaababxxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dz4_A_3601dz4   A     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 360
1dz4_A_3601dz4   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 362
1dz4_A_3601dz4   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 363
1dz4_A_3601dz4   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 366
1dz4_A_3601dz4   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 367
1dz4_A_3601dz4   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL L - 375
1dz4_A_3601dz4   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL P - 379
1dz4_A_3601dz4   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL D - 380
1dz4_A_3601dz4   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL F - 381
2dnj_A_2432dnj   A     NAGN-ACETYL-D-GLUCOSAMINE E - 244
2dnj_A_2432dnj   A     NAGN-ACETYL-D-GLUCOSAMINE M - 245
2dnj_A_2432dnj   A     NAGN-ACETYL-D-GLUCOSAMINE A - 248

Clusters included in this Subclass
CLUSTER: HE.4.218