Information on SUBCLASS 4.52.1 |
Subclass Accession number: 346
Subclass: 4.52.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 2 Average sequence ID (%) : 7.1 +/- 0.0 Average RMSD (Å) : 0.900 +/- 0.000 Consensus geometry
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Consensus Sequence: | XXXXphXh |
(φψ)-conformation: | aababpbb |
Pattern: | x | [EK] | [EM] | [AW] | [L] | [AT] | x | x | [DP] | [DH] | [FY] | [PS] | [IV] | x |
Conservation: | -1.207 | 0.445 | -0.794 | -0.175 | 1.270 | -0.175 | -1.413 | -1.207 | 0.238 | 0.445 | 1.889 | -0.175 | 0.857 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dz4_A_360 | 1dz4 | A | 371 | 383 | LKEWLTRIPDFSI. | HHHHHHH----EE. | aaaaaaababbbx. |
2dnj_A_243 | 2dnj | A | 243 | 256 | NEMALAISDHYPVE | HHHHHHH-SB--EE | aaaaaaababxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dz4_A_360 | 1dz4 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | Q - 360 |
1dz4_A_360 | 1dz4 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 362 |
1dz4_A_360 | 1dz4 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | A - 363 |
1dz4_A_360 | 1dz4 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | E - 366 |
1dz4_A_360 | 1dz4 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | I - 367 |
1dz4_A_360 | 1dz4 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | L - 375 |
1dz4_A_360 | 1dz4 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | P - 379 |
1dz4_A_360 | 1dz4 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | D - 380 |
1dz4_A_360 | 1dz4 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | F - 381 |
2dnj_A_243 | 2dnj | A | NAGN-ACETYL-D-GLUCOSAMINE | E - 244 |
2dnj_A_243 | 2dnj | A | NAGN-ACETYL-D-GLUCOSAMINE | M - 245 |
2dnj_A_243 | 2dnj | A | NAGN-ACETYL-D-GLUCOSAMINE | A - 248 |
Clusters included in this Subclass |
CLUSTER: HE.4.218 |