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Information on SUBCLASS 9.4.1
Subclass Accession number: 3520
Subclass: 9.4.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 69.9 +/- 19.9
Average RMSD (Å) : 0.289 +/- 0.093

Consensus geometry
d (Å): 21 delta (°): 90-135 theta (°): 0-45 rho (°): 315-360
Consensus Sequence: GNNTPhFFhRDhX
(φψ)-conformation: bbababbababaa
Pattern: [G][n][FLWY][D][LMW][V][GY][N][N][FT][P][ITV][F][FY][IL][QR][D][AP][hilm][KL][F][PT][DHS][FLM][iv][HR][ast]x
Conservation:1.284-0.773-0.4071.284-0.7500.299-0.6151.2841.284-0.6741.776-0.6271.2840.683-0.185-0.0761.284-0.526-1.477-0.7991.284-0.050-0.816-0.554-1.0860.391-1.215-1.507
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4e_A_1361a4e   A136163GNLDWVYNNTPVFFIRDPSKFPHFIHTQEEEEEEEESSSS-S-S-TTHHHHHHHHHexbbbxbbababbababaaaaaaaaaaa
1dgf_A_1411dgf   A141168GNWDLVGNNTPIFFIRDPILFPSFIHSQEEEEEEEESSSS-S-SSGGGHHHHHHHHexbbbxxbababbababaaaaaaaaaaa
1e93_A_1201e93   A120147GNWDMVGNNTPVFYLRDPLKFPDLNHIVEEEEEEEESSS--S-SSGGGHHHHHHHHexbxbxbbababbababaaaaaaaaaaa
1gwe_A_1261gwe   A126153GNYDLVGNNTPIFFLRDPMKFTHFIRSQEEEEEEEESSS--S-SSGGGHHHHHHHHexbbbxbbababbababwaaaaaaaaaa
1m7s_A_1431m7s   A143170GNWDLVGNNFPTFFIRDAIKFPDMVHAFEEEEEEEESSSS-S-S-GGGHHHHHHHHexbbbxbbaxabbababaaaaaaaaaaa
1p80_A_1941p80   A194221GIFDLVGNNTPIFFIQDAHKFPDFVHAVEEEEEEEESSSS-S-S-GGGHHHHHHHHexbbbbbbababbababaaaaaaaaaaa
1qwl_A_1221qwl   A122149GNWDLVGNNTPVFFIRDAIKFPDFIHTQEEEEEEEESSS--S-SSGGGHHHHHHHHexxbbxbbababbababaaaaaaaaaaa
1si8_A_1201si8   A120147GNYDLVGNNTPIFFIRDAIKFPDFIHSQEEEEEEEESSSS-S-S-GGGHHHHHHHHexbbbbbbababbababaaaaaaaaaaa
4blc_A_1404blc   A140167GNWDLVGNNTPIFFIRDALLFPSFIHSQEEEEEEEESSSS-S-SSTTTHHHHHHHHexbxbxxbababbababaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a4e_A_1361a4e   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 141
1a4e_A_1361a4e   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 142
1a4e_A_1361a4e   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 143
1a4e_A_1361a4e   A     AZIAZIDE ION N - 143
1a4e_A_1361a4e   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 148
1a4e_A_1361a4e   A     AZIAZIDE ION F - 148
1a4e_A_1361a4e   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 150
1a4e_A_1361a4e   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 152
1a4e_A_1361a4e   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 153
1a4e_A_1361a4e   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 154
1a4e_A_1361a4e   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 156
1a4e_A_1361a4e   A     AZIAZIDE ION F - 156
1a4e_A_1361a4e   A     AZIAZIDE ION I - 160
1dgf_A_1411dgf   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 146
1dgf_A_1411dgf   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 147
1dgf_A_1411dgf   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 148
1dgf_A_1411dgf   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 150
1dgf_A_1411dgf   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE P - 151
1dgf_A_1411dgf   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 152
1dgf_A_1411dgf   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 152
1dgf_A_1411dgf   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 153
1dgf_A_1411dgf   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 155
1dgf_A_1411dgf   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 157
1dgf_A_1411dgf   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 158
1dgf_A_1411dgf   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 159
1dgf_A_1411dgf   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 161
1dgf_A_1411dgf   A     ACTACETATE ION Q - 168
1e93_A_1201e93   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 125
1e93_A_1201e93   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 126
1e93_A_1201e93   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 127
1e93_A_1201e93   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 129
1e93_A_1201e93   A     OMTS-DIOXYMETHIONINE F - 132
1e93_A_1201e93   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 132
1e93_A_1201e93   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 134
1e93_A_1201e93   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 136
1e93_A_1201e93   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 137
1e93_A_1201e93   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 138
1e93_A_1201e93   A     OMTS-DIOXYMETHIONINE F - 140
1e93_A_1201e93   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 140
1e93_A_1201e93   A     OMTS-DIOXYMETHIONINE L - 143
1e93_A_1201e93   A     OMTS-DIOXYMETHIONINE N - 144
1e93_A_1201e93   A     OMTS-DIOXYMETHIONINE V - 147
1gwe_A_1261gwe   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 131
1gwe_A_1261gwe   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 132
1gwe_A_1261gwe   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 133
1gwe_A_1261gwe   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 135
1gwe_A_1261gwe   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 137
1gwe_A_1261gwe   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 138
1gwe_A_1261gwe   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 142
1gwe_A_1261gwe   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 143
1gwe_A_1261gwe   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 146
1m7s_A_1431m7s   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 148
1m7s_A_1431m7s   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 149
1m7s_A_1431m7s   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 150
1m7s_A_1431m7s   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 152
1m7s_A_1431m7s   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 154
1m7s_A_1431m7s   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 155
1m7s_A_1431m7s   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 157
1m7s_A_1431m7s   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 159
1m7s_A_1431m7s   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 160
1m7s_A_1431m7s   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 163
1p80_A_1941p80   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 199
1p80_A_1941p80   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 200
1p80_A_1941p80   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 201
1p80_A_1941p80   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 205
1p80_A_1941p80   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 206
1p80_A_1941p80   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 208
1p80_A_1941p80   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 210
1p80_A_1941p80   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 211
1p80_A_1941p80   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 214
1qwl_A_1221qwl   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 127
1qwl_A_1221qwl   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 128
1qwl_A_1221qwl   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 129
1qwl_A_1221qwl   A     OXYOXYGEN MOLECULE N - 129
1qwl_A_1221qwl   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 131
1qwl_A_1221qwl   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 133
1qwl_A_1221qwl   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 134
1qwl_A_1221qwl   A     OXYOXYGEN MOLECULE F - 134
1qwl_A_1221qwl   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 136
1qwl_A_1221qwl   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 138
1qwl_A_1221qwl   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 139
1qwl_A_1221qwl   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 140
1qwl_A_1221qwl   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 142
1qwl_A_1221qwl   A     OXYOXYGEN MOLECULE F - 142
1qwl_A_1221qwl   A     OXYOXYGEN MOLECULE I - 146
1si8_A_1201si8   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 131
1si8_A_1201si8   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 134
1si8_A_1201si8   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 137
1si8_A_1201si8   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 138
1si8_A_1201si8   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 141
4blc_A_1404blc   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 145
4blc_A_1404blc   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 146
4blc_A_1404blc   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 147
4blc_A_1404blc   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 149
4blc_A_1404blc   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE P - 150
4blc_A_1404blc   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 151
4blc_A_1404blc   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 154
4blc_A_1404blc   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 156
4blc_A_1404blc   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 157
4blc_A_1404blc   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 160

Clusters included in this Subclass
CLUSTER: EH.11.1