Information on SUBCLASS 9.8.1 |
Subclass Accession number: 3524
Subclass: 9.8.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 22.7 +/- 19.1 Average RMSD (Å) : 0.800 +/- 0.245 Consensus geometry
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Consensus Sequence: | XhXXXXhhXhXXX |
(φψ)-conformation: | bbFbaaaabppaa |
Pattern: | [AG] | x | [IL] | [ITV] | x | [AIM] | [AGST] | [AS] | [FIKV] | [AES] | [AGSV] | [FILW] | x | [GP] | x | [EP] | [GNQS] | [LMY] | [AGIY] | [AGT] | [SY] | [GNS] | x | [AS] | [KR] | [AGM] | [A] | [LV] | [HRST] | x | [FLM] | x | [KQR] | [AST] | [AL] | [AS] |
Conservation: | 1.551 | -1.143 | 1.306 | 0.242 | -1.156 | -0.225 | -0.476 | 0.932 | -1.151 | -0.073 | -0.982 | -0.364 | -1.657 | 0.484 | -1.071 | 0.698 | -0.476 | 0.122 | -1.601 | -0.215 | 1.128 | 0.543 | -0.339 | 0.715 | 1.826 | -0.577 | 2.055 | 0.926 | -0.757 | -1.714 | 0.399 | -0.870 | 0.902 | 0.270 | -0.179 | 0.926 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hdr_*_124 | 1hdr | - | 129 | 164 | GLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLA | EEEEEE--GGGGS--TTBHHHHHHHHHHHHHHHHHH | xbbbbbxbaaaabxbaaaaaaaaaaaaaaaaaaaaa |
1hxh_A_131 | 1hxh | A | 131 | 166 | GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAA | EEEEEE--GGGTS--TTBHHHHHHHHHHHHHHHHHH | ebbbbxFbaaaabxxaaaaaaaaaaaaaaaaaaaaa |
1nxq_A_135 | 1nxq | A | 135 | 170 | ASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAA | EEEEEE--GGGTS--TTBHHHHHHHHHHHHHHHHHH | xbbbbxFbaaaabxbaaaaaaaaaaaaaaaaaaaaa |
1o5i_A_121 | 1o5i | A | 121 | 156 | GRIVAITSFSVISPIENLYTSNSARMALTGFLKTLS | EEEEEE--GGGTS--TTBHHHHHHHHHHHHHHHHHH | bbbbbxFbaaaabpxaaaaaaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1hdr_*_124 | 1hdr | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | A - 134 |
1hdr_*_124 | 1hdr | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | G - 135 |
1hdr_*_124 | 1hdr | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | A - 136 |
1hdr_*_124 | 1hdr | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | Y - 149 |
1hdr_*_124 | 1hdr | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | K - 153 |
1nxq_A_135 | 1nxq | A | MGMAGNESIUM ION | V - 147 |
Clusters included in this Subclass |
CLUSTER: EH.11.23 |