ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 9.16.1

Subclass Accession number: 3532
Subclass: 9.16.1

Type: EH beta-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Number of loops: 3

Average sequence ID (%) : 46.2 +/- 8.9
Average RMSD (Å) : 0.500 +/- 0.173

Consensus geometry

d (Å): 9

delta (°): 45-90

theta (°): 135-180

rho (°): 0-45

Consensus Sequence:	hhHGGGhhhhphE
(φψ)-conformation:	bbppgllabebaa

Pattern:	x	[P]	[AV]	[L]	[LV]	[WY]	[IY]	[H]	[G]	[G]	[G]	[FW]	[AV]	[IV]	[CG]	[DST]	[AIL]	[E]	[ST]	[HS]	[D]	[AP]	[FLV]	[C]	x	x	[ILV]	[A]	[KR]	x	x
Conservation:	-1.270	1.528	-0.604	0.226	-0.400	0.764	-0.347	1.963	1.094	1.094	1.094	0.394	-0.608	0.018	-0.558	-0.788	-0.933	0.660	-0.329	-0.190	1.094	-0.294	-0.836	2.397	-1.076	-1.319	-0.353	0.226	0.038	-1.270	-1.415

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1jji_A_79	1jji	A	79	109	SPVLVYYHGGGFVICSIESHDALCRRIARLS	EEEEEEE--STTTS--TGGGHHHHHHHHHHH	bxbbxbbxxgvvabebaaaaaaaaaaaaaaa
1lzl_A_79	1lzl	A	79	109	VPVLLWIHGGGFAIGTAESSDPFCVEVAREL	EEEEEEE--STTTS--GGGGHHHHHHHHHHH	bxbbxbbxxgvvabebaaaaaaaaaaaaaaa
1qz3_A_74	1qz3	A	74	104	YPALVYYHGGGWVVGDLETHDPVCRVLAKDG	EEEEEEE--STTTS--TTTTHHHHHHHHHHH	xxbbxbbxxglvabebaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1jji_A_79	1jji	A	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	G - 87
1jji_A_79	1jji	A	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	G - 88
1jji_A_79	1jji	A	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	G - 89
1jji_A_79	1jji	A	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	F - 90
1qz3_A_74	1qz3	A	HDS1-HEXADECANOSULFONIC ACID	G - 82
1qz3_A_74	1qz3	A	HDS1-HEXADECANOSULFONIC ACID	G - 83
1qz3_A_74	1qz3	A	HDS1-HEXADECANOSULFONIC ACID	G - 84
1qz3_A_74	1qz3	A	HDS1-HEXADECANOSULFONIC ACID	W - 85
1qz3_A_74	1qz3	A	HDS1-HEXADECANOSULFONIC ACID	V - 87

Clusters included in this Subclass