ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 9.20.1

Subclass Accession number: 3536
Subclass: 9.20.1

Type: EH beta-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.7 (>50 %)  1.7.2 (>50 %)  1.7.2.3 3.4 (>50 %)  3.4.17 (>50 %)
GO : GO:0004180 (>75 %)  GO:0008233 (>75 %)  GO:0008235 (>75 %)  GO:0008237 (>75 %)  GO:0008238 (>75 %)  GO:0030151 (>50 %)  GO:0046914 (>50 %)
SCOP : 53705 (>75 %)  53706 (>75 %)  53707 (>75 %)  54861 (>50 %)  54897 (>50 %)  54898 (>50 %)

Number of loops: 3

Average sequence ID (%) : 53.9 +/- 6.0
Average RMSD (Å) : 0.333 +/- 0.058

Consensus geometry

d (Å): 11

delta (°): 45-90

theta (°): 135-180

rho (°): 315-360

Consensus Sequence:	hYPYXYXppXhXc
(φψ)-conformation:	bbwwaabapppaa

Pattern:	[LM]	[LM]	[IL]	[Y]	[P]	[Y]	[GS]	[Y]	[AKT]	[TY]	[KQ]	x	[GIP]	[AEP]	[DN]	[KN]	[AST]	[E]	[L]	[N]	[AQ]	[ILV]	[A]	[K]	[AS]	[AT]	[V]	[AK]	[AE]	[L]	[AK]	[S]	[L]	[HY]
Conservation:	-0.093	-0.093	-0.208	1.927	1.927	1.927	-0.434	1.927	-1.221	-0.773	-0.206	-1.272	-1.874	-1.221	0.063	-0.356	-0.805	0.858	0.323	1.393	-0.853	-0.389	0.323	0.858	-0.474	-0.625	0.323	-0.891	-0.891	0.323	-0.853	0.323	0.323	0.713

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1kwm_A_201	1kwm	A	201	234	MMIYPYSYAYKLGENNAELNALAKATVKELASLH	EEEES-SSSS---TTHHHHHHHHHHHHHHHHHHH	bbbbwwaabxbbxaaaaaaaaaaaaaaaaaaaaa
1m4l_A_201	1m4l	A	201	234	LLLYPYGYTTQSIPDKTELNQVAKSAVAALKSLY	EEEES-SS-S---TTHHHHHHHHHHHHHHHHHHH	bbbbwwaabapxxaaaaaaaaaaaaaaaaaaaaa
1pca_*_201	1pca	-	201	234	LLLYPYGYKTQSPADKSELNQIAKSAVAALKSLY	EEEES-SS-SS--TTHHHHHHHHHHHHHHHHHHH	bbbbwwaabaxxxaaaaaaaaaaaaaaaaaaaaa

Clusters included in this Subclass