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Information on SUBCLASS 9.25.1
Subclass Accession number: 3541
Subclass: 9.25.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0003989 (>75 %)  GO:0004075 (>75 %)  GO:0016421 (>75 %)  GO:0016741 (>50 %)  GO:0016743 (>50 %)  GO:0016874 (>75 %)  GO:0016879 (>75 %)  GO:0016885 (>75 %)  GO:0047154 (>50 %)  
SCOP : 52095 (>75 %)  52096 (>75 %)  89572 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 20.6 +/- 16.2
Average RMSD (Å) : 0.367 +/- 0.058

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: pphphXXGXhcXp
(φψ)-conformation: pbaablllppbaa
Pattern: [R][PQS][FV]x[AIV][AV][AS][NQ][DQ][FIP][ST][FV][KM]x[G][CS][AFL][DG]x[NQT][AEQ][DS][DET][FK][AFV][ANV][EK][FTV][MTV][EN][FQY][AC]xx
Conservation:2.312-0.4360.033-1.269-0.1030.2070.5460.9390.901-1.1860.8400.0330.247-1.2693.0620.320-0.7690.653-1.269-0.270-0.2700.377-0.103-0.345-0.769-1.1030.936-0.686-0.2700.687-0.1030.664-1.519-1.019
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1on3_A_3271on3   A327360RSVGIVANQPSVMSGCLDINASDKAAEFVNFCDSEEEEEEEE-TTSGGG-B-HHHHHHHHHHHHHHHHxxbbbbbxbaabllvpxbaaaaaaaaaaaaaaaa
1on3_A_961on3   A96129RPVHAASQDFTVMGGSAGETQSTKVVETMEQALLEEEEEEEE-TTTGGG-B-HHHHHHHHHHHHHHHHxwbbbbbxbaabllvpxxaaaaaaaaaaaaaaaa
1uyr_A_15801uyr   A15801613RQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKEEEEEEEE-TTSGGG-B-HHHHHHHHHHHHHHHHbbbbbbbxbaaxllvxxbaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1on3_A_961on3   A     MCAMETHYLMALONYL-COENZYME A F - 105
1on3_A_961on3   A     MCAMETHYLMALONYL-COENZYME A M - 108
1on3_A_961on3   A     MCAMETHYLMALONYL-COENZYME A G - 109
1on3_A_961on3   A     MCAMETHYLMALONYL-COENZYME A G - 110
1on3_A_961on3   A     MCAMETHYLMALONYL-COENZYME A S - 111
1on3_A_961on3   A     MCAMETHYLMALONYL-COENZYME A A - 112
1on3_A_3271on3   A     CDCADMIUM ION I - 345
1on3_A_3271on3   A     CDCADMIUM ION D - 349

Clusters included in this Subclass
CLUSTER: EH.9.64