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Information on SUBCLASS 10.10.1
Subclass Accession number: 3559
Subclass: 10.10.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.11 (>50 %)  1.11.1 (>50 %)  1.11.1.7
GO : GO:0004601 (>75 %)  GO:0016684 (>75 %)  
SCOP : 48112 (>75 %)  48113 (>75 %)  48114 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 49.2 +/- 5.8
Average RMSD (Å) : 0.133 +/- 0.058

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XXhDhpTPphFDNc
(φψ)-conformation: bpabaabaabpbaa
Pattern: x[TV][DNV][FL][D][LV][RS][T][P][DNT][AIV][F][D][N][KN][Y][FY][AIV][DN][L]x
Conservation:-1.335-0.540-1.388-0.5691.132-0.489-0.7780.6601.605-0.810-0.8631.1321.1321.132-0.3991.6050.621-0.8630.0050.187-1.178
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bgp_*_2211bgp   -221241RTVLDVRTPNVFDNKYYIDLVEEES-SS-TTS-STHHHHHHHbbxabaabaabxbaaaaaaaa
1gwu_A_2181gwu   A218238LVDFDLRTPTIFDNKYYVNLEEEES-SS-TT--STHHHHHHHbbxabaabaabxbaaaaaaaa
1pa2_A_2171pa2   A217237ITNLDLSTPDAFDNNYFANLQEEES-SSSSSS-STHHHHHHHbbxabaabaaxxbaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bgp_*_2211bgp   *     HEMPROTOPORPHYRIN IX CONTAINING FE R - 221
1bgp_*_2211bgp   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 224
1bgp_*_2211bgp   *     CACALCIUM ION L - 224
1bgp_*_2211bgp   *     CACALCIUM ION D - 225
1bgp_*_2211bgp   *     CACALCIUM ION R - 227
1bgp_*_2211bgp   *     CACALCIUM ION T - 228
1bgp_*_2211bgp   *     CACALCIUM ION P - 229
1bgp_*_2211bgp   *     CACALCIUM ION N - 230
1bgp_*_2211bgp   *     CACALCIUM ION V - 231
1bgp_*_2211bgp   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 232
1bgp_*_2211bgp   *     CACALCIUM ION F - 232
1bgp_*_2211bgp   *     CACALCIUM ION D - 233
1bgp_*_2211bgp   *     CACALCIUM ION N - 234
1bgp_*_2211bgp   *     CACALCIUM ION K - 235
1bgp_*_2211bgp   *     CACALCIUM ION Y - 236
1gwu_A_2181gwu   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 218
1gwu_A_2181gwu   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 221
1gwu_A_2181gwu   A     CACALCIUM ION F - 221
1gwu_A_2181gwu   A     CACALCIUM ION D - 222
1gwu_A_2181gwu   A     CACALCIUM ION R - 224
1gwu_A_2181gwu   A     CACALCIUM ION T - 225
1gwu_A_2181gwu   A     CACALCIUM ION P - 226
1gwu_A_2181gwu   A     CACALCIUM ION T - 227
1gwu_A_2181gwu   A     CACALCIUM ION I - 228
1gwu_A_2181gwu   A     CACALCIUM ION F - 229
1gwu_A_2181gwu   A     CACALCIUM ION D - 230
1gwu_A_2181gwu   A     CACALCIUM ION N - 231
1gwu_A_2181gwu   A     CACALCIUM ION K - 232
1gwu_A_2181gwu   A     CACALCIUM ION Y - 233
1pa2_A_2171pa2   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 217
1pa2_A_2171pa2   A     CACALCIUM ION L - 220
1pa2_A_2171pa2   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 220
1pa2_A_2171pa2   A     CACALCIUM ION D - 221
1pa2_A_2171pa2   A     CACALCIUM ION S - 223
1pa2_A_2171pa2   A     CACALCIUM ION T - 224
1pa2_A_2171pa2   A     CACALCIUM ION P - 225
1pa2_A_2171pa2   A     CACALCIUM ION D - 226
1pa2_A_2171pa2   A     CACALCIUM ION A - 227
1pa2_A_2171pa2   A     CACALCIUM ION F - 228
1pa2_A_2171pa2   A     CACALCIUM ION D - 229
1pa2_A_2171pa2   A     CACALCIUM ION Y - 232
1pa2_A_2171pa2   A     MGMAGNESIUM ION A - 234
1pa2_A_2171pa2   A     MGMAGNESIUM ION N - 235
1pa2_A_2171pa2   A     MGMAGNESIUM ION Q - 237
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gwu_A_2181gwu   A CA2CA BINDING SITE FOR CHAIN AD - 222
1gwu_A_2181gwu   A CA2CA BINDING SITE FOR CHAIN AT - 225
1gwu_A_2181gwu   A CA2CA BINDING SITE FOR CHAIN AI - 228
1gwu_A_2181gwu   A CA2CA BINDING SITE FOR CHAIN AD - 230

Clusters included in this Subclass
CLUSTER: EH.10.68