ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 11.6.1

Subclass Accession number: 3569
Subclass: 11.6.1

Type: EH beta-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : - (>75 %)  1 (>75 %)  1.3 (>50 %)  1.3.99 (>50 %)  1.3.99.1
GO : GO:0000104 (>50 %)  GO:0015036 (>50 %)  GO:0015036 (>75 %)  GO:0016627 (>50 %)
SCOP : 51904 (>75 %)  51904 (>75 %)  51905 (>75 %)  51905 (>75 %)  51934 (>75 %)  51943 (>75 %)

Number of loops: 5

Average sequence ID (%) : 22.8 +/- 28.4
Average RMSD (Å) : 0.680 +/- 0.110

Consensus geometry

d (Å): 19

delta (°): 45-90

theta (°): 135-180

rho (°): 225-270

Consensus Sequence:	hXXXXXXhXXhhXXp
(φψ)-conformation:	bbapabplaaabpaa

Pattern:	[EHK]	[V]	[it]	x	[ILV]	x	[IPT]	[ael]	[adk]	[GR]	[npv]	[LM]	[EGS]	x	[AIVY]	[ALT]	[ADP]	[ekpq]	x	[FLV]	[AST]	[ADN]	[FVW]	[LTVY]	x	[EHR]	[ekl]	[HMV]	[AEKR]
Conservation:	0.989	2.786	-0.019	-0.495	1.310	0.007	-0.497	-1.087	-0.966	0.857	-1.715	1.998	0.161	-0.196	-0.486	-0.369	0.224	-0.646	-1.243	0.367	0.703	0.202	0.616	-0.707	-1.040	0.703	-1.290	-0.178	0.010

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1d7y_A_170	1d7y	A	170	198	HVSLVETQPRLMSRAAPATLADFVARYHA	EEEEEESSSSTTTTTS-HHHHHHHHHHHH	xbbbbbaxabxlaaabxaaaaaaaaaaaa
1gv4_A_328	1gv4	A	328	356	EVIQLFPEKGNMGKILPQYLSNWTMEKVK	EEEEE-SSSSTTTTTS-HHHHHHHHHHHH	xbbbbbaxaeplaaaxwaaaaaaaaaaaa
1m6i_A_329	1m6i	A	329	357	EVIQLFPEKGNMGKILPEYLSNWTMEKVR	EEEEE-SSSSTTTTTS-HHHHHHHHHHHH	bbbbbbaxabplaaaxxaaaaaaaaaaaa
1nhp_*_174	1nhp	-	174	202	KVTVIDILDRPLGVYLDKEFTDVLTEEME	EEEEEESSSSTTTTT--HHHHHHHHHHHH	xbbbbbaxabxUaaabxaaaaaaaaaaaa
1q1r_A_174	1q1r	A	174	202	HVTLLDTAARVLERVTAPPVSAFYEHLHR	EEEEE-SSSSTTTTTS-HHHHHHHHHHHH	xbbbbbaxabxlaaabxaaaaaaaaaaaa

Clusters included in this Subclass