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Information on SUBCLASS 12.2.1
Subclass Accession number: 3579
Subclass: 12.2.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 32.6 +/- 26.0
Average RMSD (Å) : 0.617 +/- 0.147

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: hXpKhhpPhhphXXDh
(φψ)-conformation: bbppabpppeapbpaa
Pattern: x[ILY]x[ALW]x[EKQW][K][AFGIMV]x[DE][AP][LP][FGY][DEQT][ACS][mr][ANPS][DT][CFGVY]x[IT][AFL][ATV][AEGR][FILV][AY][ehnr]x
Conservation:-1.0300.285-1.051-0.764-0.742-0.2432.806-1.175-0.0602.0871.8080.108-0.2400.1560.401-0.048-0.4531.426-1.202-0.5940.521-0.3000.122-0.7540.2150.309-0.653-0.934
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dms_*_4941dms   -494521GILAMKKIVEPLYEARSDYDIFAAVAEREEEEE---S---TT-B-HHHHHHHHHHHebbxxxxabxpxeaxbxaaaaaaaaaaa
1eu1_A_4941eu1   A494521AILAMKKVVDPLYEARSDYDIFAALAEREEEEE---S---TT-B-HHHHHHHHHHHbbbxxxpabxpxeaxbxaaaaaaaaaaa
1g8k_A_5461g8k   A546573RIRLSEKFMDPPGTAMADCLIAARIANAEEEEE---S--STT-B-HHHHHHHHHHHxxbbxxxNbxwxeaxbpaaaaaaaaaaa
1kqf_A_6321kqf   A632659WLQWHWKGQDAPGEARNDGEILAGIYHHEEEEE---S--STT-B-HHHHHHHHHHHxxbxbbxabxxxeapbxaaaaaaaaaaa
1tmo_*_5031tmo   -503530GILAMQKMVEPLFDSLSDFEIFTRFAAVEEEEE---S---TT-B-HHHHHHHHHHHbbbbbxxabxpxeaxbxaaaaaaaaaaa
2nap_A_4772nap   A477504RYSLTEKAVDPPGQCRPTVNTLVEFARREEEEE---S---TT-B-HHHHHHHHHHHxbbxbxxabxxxeaxbxaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dms_*_4941dms   *     PGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE D - 511
1eu1_A_4941eu1   A     GLCGLUCOSE A - 508
1eu1_A_4941eu1   A     GLCGLUCOSE R - 509
1eu1_A_4941eu1   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE D - 511
1eu1_A_4941eu1   A     GLCGLUCOSE D - 513
1eu1_A_4941eu1   A     CDCADMIUM ION R - 521
1g8k_A_5461g8k   A     EDO1,2-ETHANEDIOL R - 546
1g8k_A_5461g8k   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE D - 563
1kqf_A_6321kqf   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE D - 649
1tmo_*_5031tmo   *     2MDGUANYLATE-O'-PHOSPHORIC ACID MONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,5,6,7,8A,9,10,10A-OCTAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL) ESTER D - 520
2nap_A_4772nap   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE T - 494

Clusters included in this Subclass
CLUSTER: EH.11.5