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Information on SUBCLASS 5.5.3
Subclass Accession number: 359
Subclass: 5.5.3 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 11.7 +/- 12.3
Average RMSD (Å) : 0.967 +/- 0.208

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: hhXXppXhX
(φψ)-conformation: aalaaaabb
Pattern: xx[QRY][IL][CRS][DKT][AK][FLM][EGQ][AP][GL][DGR]x[DKS][DNR]x[IVY]x[RT][GV]
Conservation:-0.400-1.3760.0872.503-0.725-0.4000.6921.063-0.0751.042-1.119-0.888-1.3760.0870.413-0.4000.738-0.7251.318-0.457
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f1u_A_2221f1u   A225244IIQICDKMGALRISDRIERGHHHHHHHHHHTT-GGGEEEEaaaaaaaaaaalaaaaxabe
1gxq_A_1931gxq   A199218IRRLRKALEPGGHDRMVQTVHHHHHHHHGGGTGGGGEEEEaaaaaaaaaaavaaaaxbxb
1oxw_A_3001oxw   A300319DYYLSTAFQALDSKNNYLRVHHHHHHHHHHTT-GGGEEEEaaaaaaaaaaalaaaabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1oxw_A_3001oxw   A     MSESELENOMETHIONINE D - 300
1oxw_A_3001oxw   A     MSESELENOMETHIONINE Y - 301
1oxw_A_3001oxw   A     MSESELENOMETHIONINE Y - 302
1oxw_A_3001oxw   A     MSESELENOMETHIONINE L - 303
1oxw_A_3001oxw   A     MSESELENOMETHIONINE F - 307
1oxw_A_3001oxw   A     MSESELENOMETHIONINE S - 312
1oxw_A_3001oxw   A     MSESELENOMETHIONINE N - 315
1oxw_A_3001oxw   A     MSESELENOMETHIONINE Y - 316

Clusters included in this Subclass
CLUSTER: HE.7.40