Information on SUBCLASS 5.5.3 |
Subclass Accession number: 359
Subclass: 5.5.3 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 11.7 +/- 12.3 Average RMSD (Å) : 0.967 +/- 0.208 Consensus geometry
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Consensus Sequence: | hhXXppXhX |
(φψ)-conformation: | aalaaaabb |
Pattern: | x | x | [QRY] | [IL] | [CRS] | [DKT] | [AK] | [FLM] | [EGQ] | [AP] | [GL] | [DGR] | x | [DKS] | [DNR] | x | [IVY] | x | [RT] | [GV] |
Conservation: | -0.400 | -1.376 | 0.087 | 2.503 | -0.725 | -0.400 | 0.692 | 1.063 | -0.075 | 1.042 | -1.119 | -0.888 | -1.376 | 0.087 | 0.413 | -0.400 | 0.738 | -0.725 | 1.318 | -0.457 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f1u_A_222 | 1f1u | A | 225 | 244 | IIQICDKMGALRISDRIERG | HHHHHHHHHHTT-GGGEEEE | aaaaaaaaaaalaaaaxabe |
1gxq_A_193 | 1gxq | A | 199 | 218 | IRRLRKALEPGGHDRMVQTV | HHHHHHHHGGGTGGGGEEEE | aaaaaaaaaaavaaaaxbxb |
1oxw_A_300 | 1oxw | A | 300 | 319 | DYYLSTAFQALDSKNNYLRV | HHHHHHHHHHTT-GGGEEEE | aaaaaaaaaaalaaaabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1oxw_A_300 | 1oxw | A | MSESELENOMETHIONINE | D - 300 |
1oxw_A_300 | 1oxw | A | MSESELENOMETHIONINE | Y - 301 |
1oxw_A_300 | 1oxw | A | MSESELENOMETHIONINE | Y - 302 |
1oxw_A_300 | 1oxw | A | MSESELENOMETHIONINE | L - 303 |
1oxw_A_300 | 1oxw | A | MSESELENOMETHIONINE | F - 307 |
1oxw_A_300 | 1oxw | A | MSESELENOMETHIONINE | S - 312 |
1oxw_A_300 | 1oxw | A | MSESELENOMETHIONINE | N - 315 |
1oxw_A_300 | 1oxw | A | MSESELENOMETHIONINE | Y - 316 |
Clusters included in this Subclass |
CLUSTER: HE.7.40 |