ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 13.6.1

Subclass Accession number: 3593
Subclass: 13.6.1

Type: EH beta-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.18 (>75 %)  1.18.1 (>75 %)  1.18.1.2
GO : GO:0004324 (>50 %)  GO:0005489 (>50 %)  GO:0008937 (>50 %)  GO:0016730 (>50 %)  GO:0016731 (>50 %)
SCOP : 52342 (>75 %)  52343 (>75 %)  52344 (>75 %)  54636 (>75 %)  54637 (>75 %)  89902 (>50 %)

Number of loops: 3

Average sequence ID (%) : 28.7 +/- 34.8
Average RMSD (Å) : 0.767 +/- 0.289

Consensus geometry

d (Å): 11

delta (°): 45-90

theta (°): 135-180

rho (°): 315-360

Consensus Sequence:	XXhpXXpXpPhGhhXhh
(φψ)-conformation:	bppbaaappaagbppaa

Pattern:	[IL]	[ET]	[AM]	[EQT]	[MQ]	[PR]	[IV]	[DE]	x	[GR]	[DT]	[CHK]	[DQ]	[P]	[AF]	[G]	[IL]	[LV]	[HW]	[GY]	[GP]	[AN]	[SY]	x	x	[LW]	[AL]	[DE]	[AST]	[AIL]	[GS]	[RS]	x	[AY]	[FG]	[FIY]
Conservation:	0.534	-0.194	-0.426	-0.473	0.175	-0.099	0.903	1.145	-0.971	-0.417	-0.048	-1.054	0.321	3.514	-0.478	2.767	0.534	0.165	1.013	-0.407	-0.038	-0.649	-0.502	-1.220	-1.303	0.084	-0.573	1.059	-0.307	-0.722	0.260	-0.426	-1.137	-0.502	-0.553	0.026

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1lo7_A_4	1lo7	A	5	40	ITMQQRIEFGDCDPAGIVWYPNYHRWLDAASRNYFI	EEEEEE--GGGB-TTSSB-THHHHHHHHHHHHHHHH	bbbbbxxbaaabxaavbpxaaaaaaaaaaaaaaaaa
1vh5_A_36	1vh5	A	36	71	LEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGY	EEEEEE-STTTB-TTSSB-HHHHHHHHHHHHHHHHH	bbbbbxxbaaaxxaavbpxaaaaaaaaaaaaaaaaa
1vh9_A_36	1vh9	A	36	71	LEAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGF	EEEEEE-STTTB-TTSSB-HHHHHHHHHHHHHHHHH	bbbbbxbbaaaxbaagxxxaaaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1lo7_A_4	1lo7	A	4CO4-HYDROXYPHENACYL COENZYME A	D - 32
1lo7_A_4	1lo7	A	4CO4-HYDROXYPHENACYL COENZYME A	R - 36

Clusters included in this Subclass