Information on SUBCLASS 24.1.1 |
Subclass Accession number: 3633
Subclass: 24.1.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : - (>75 %) 2 (>75 %) 2 (>75 %) 3 (>75 %) 3 (>75 %) GO : GO:0016798 (>75 %) GO:0016799 (>75 %) GO:0019104 (>75 %) SCOP : 52140 (>75 %) 52140 (>75 %) 52141 (>75 %) 52141 (>75 %) 52142 (>75 %) 52142 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 69.8 +/- 7.2 Average RMSD (Å) : 0.400 +/- 0.082 Consensus geometry
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Consensus Sequence: | hGQDPYHXPcQAHGLhFSVpXXhhhPPS |
(φψ)-conformation: | pbabppapplapagbpgpbppwppppaa |
Pattern: | [V] | [V] | [I] | [IL] | [G] | [Q] | [D] | [P] | [Y] | [H] | x | [P] | [GN] | [Q] | [A] | [H] | [G] | [L] | [AC] | [F] | [S] | [V] | [QR] | x | [GNP] | [IV] | [AP] | [IP] | [P] | [P] | [S] | [L] | x | [N] | [IMV] | [LY] | [AK] | [AE] | [LV] | [CEKS] | [NT] | [CDT] |
Conservation: | 0.006 | 0.006 | 0.006 | -0.454 | 0.953 | 0.479 | 0.953 | 1.426 | 1.426 | 1.899 | -0.724 | 1.426 | -0.446 | 0.479 | 0.006 | 1.899 | 0.953 | 0.006 | -0.470 | 0.953 | 0.006 | 0.006 | -0.453 | -1.502 | -1.312 | -0.222 | -0.631 | -1.088 | 1.426 | 1.426 | 0.006 | 0.006 | -1.887 | 0.953 | -0.675 | -0.663 | -0.984 | -0.984 | -0.684 | -1.621 | -0.538 | -1.370 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1akz_*_139 | 1akz | - | 139 | 180 | VVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLENIYKELSTD | EEEEE-S---STTT--SSTT---TTS---HHHHHHHHHHHHH | bbbxbabwxaxpvaxagbxvxbxpwxxpxaaaaaaaaaaaaa |
1lau_E_82 | 1lau | E | 82 | 123 | VVIIGQDPYHHPGQAHGLAFSVRANVPPPPSLRNVLAAVKNC | EEEEE-S---STTT--SSSS---TTS---HHHHHHHHHHHHH | bbbxbabxpabpvaxagbxgxbppvbpxxaaaaaaaaaaaaa |
1okb_A_139 | 1okb | A | 139 | 180 | VVILGQDPYHGPNQAHGLCFSVQKPVPPPPSLVNIYKELCTD | EEEEESS---STTT-SSSTT---TTS---HHHHHHHHHHHHH | bbbxbFbxpaxpvaxavbxvxbxxwpxpxaaaaaaaaaaaaa |
3eug_A_58 | 3eug | A | 58 | 99 | VVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENT | EEEEESS---STTT-SSSTT---TTS---HHHHHHHHHHHHH | bbbxbaxxpabxvaxagbpvxbxpvbpxxaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1okb_A_139 | 1okb | A | GOLGLYCEROL | G - 143 |
1okb_A_139 | 1okb | A | GOLGLYCEROL | Q - 144 |
1okb_A_139 | 1okb | A | GOLGLYCEROL | D - 145 |
1okb_A_139 | 1okb | A | GOLGLYCEROL | P - 146 |
1okb_A_139 | 1okb | A | GOLGLYCEROL | Y - 147 |
1okb_A_139 | 1okb | A | GOLGLYCEROL | L - 156 |
1okb_A_139 | 1okb | A | GOLGLYCEROL | C - 157 |
1okb_A_139 | 1okb | A | GOLGLYCEROL | F - 158 |
1okb_A_139 | 1okb | A | GOLGLYCEROL | S - 159 |
1okb_A_139 | 1okb | A | GOLGLYCEROL | S - 169 |
3eug_A_58 | 3eug | A | GOLGLYCEROL | G - 62 |
3eug_A_58 | 3eug | A | GOLGLYCEROL | Q - 63 |
3eug_A_58 | 3eug | A | GOLGLYCEROL | D - 64 |
3eug_A_58 | 3eug | A | GOLGLYCEROL | P - 65 |
3eug_A_58 | 3eug | A | GOLGLYCEROL | Y - 66 |
3eug_A_58 | 3eug | A | GOLGLYCEROL | L - 75 |
3eug_A_58 | 3eug | A | GOLGLYCEROL | A - 76 |
3eug_A_58 | 3eug | A | GOLGLYCEROL | F - 77 |
3eug_A_58 | 3eug | A | GOLGLYCEROL | S - 78 |
3eug_A_58 | 3eug | A | GOLGLYCEROL | S - 88 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1okb_A_139 | 1okb | A | AC1GOL BINDING SITE FOR CHAIN A | Q - 144 |
1okb_A_139 | 1okb | A | AC1GOL BINDING SITE FOR CHAIN A | D - 145 |
1okb_A_139 | 1okb | A | AC1GOL BINDING SITE FOR CHAIN A | C - 157 |
1okb_A_139 | 1okb | A | AC1GOL BINDING SITE FOR CHAIN A | F - 158 |
3eug_A_58 | 3eug | A | URAURACIL BINDING SITE | D - 64 |
Clusters included in this Subclass |
CLUSTER: EH.23.0 |