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Information on SUBCLASS 1.1.3
Subclass Accession number: 3643
Subclass: 1.1.3 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 97

Average sequence ID (%) : 11.5 +/- 15.2
Average RMSD (Å) : 0.310 +/- 0.153

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 45-90 rho (°): 45-90
Consensus Sequence: hXXXX
(φψ)-conformation: bblbb
Pattern: xx[acfgilmvwy]x[adgknqrst]xx[acfilmvy]
Conservation:-1.000-0.5020.635-0.5691.430-0.999-0.9920.998
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8i_*_2121a8i   -213220AKWVDTQVEEEES-EExbxbvxxb
1agj_A_841agj   A8592SFRPSINTEEEET-EEbbbxlxbb
1bhe_*_2101bhe   -212219ITIAYSNIEEEES-EEbbbblbbb
1bn8_A_1391bn8   A139145.KVVGGNF.EEES-EE.bbbvxbx
1bn8_A_1501bn8   A152159VIIRNIEFEEEES-EEbbbbvbxb
1bn8_A_1921bn8   A194201IWIDHCTFEEEES-EEbbbblbbb
1bn8_A_2331bn8   A235242ITMSYNYYEEEES-EEbbbblxbb
1bn8_A_2661bn8   A266273ITLHHNRYEEEES-EEbbbblxbb
1bn8_A_2871bn8   A288295VHVYNNYYEEEES-EEbxbblbbb
1bn8_A_3171bn8   A318325IYAQNNVIEEEES-EExbbblbbb
1bn8_A_3461bn8   A346352.YDSGTLL.EEES-EE.bbbvxbb
1bob_*_491bob   -4954..YKDLII..EES-EE..bblxbb
1cqq_A_1301cqq   A130137NQTARMLKEEE-SEEExxbxlxxb
1czf_A_1371czf   A137144SSITGLNIEEEES-EEbbbbvxbb
1czf_A_1591czf   A159166ITFTDVTIEEEES-EEbbbblxbb
1czf_A_1881czf   A190197VNIIKPWVEEEES-EEbbbblxbb
1czf_A_2091czf   A212219IWFTGGTCEEEES-EEbbbbvxbb
1czf_A_471czf   A4855ITLNNIEVEEEES-EEbbxxlxbx
1ee6_A_1661ee6   A167174GRIVNTRYEEEES-EEbbbblbxb
1ee6_A_1891ee6   A189196TTASGNTQEEEES-EEbbbbvxbx
1f0l_A_121f0l   A1219FVMENFSSEEEET-EEbbbxlxbb
1f8r_A_2551f8r   A255261.VHFNAQV.EESS-EE.bbxlbxx
1fid_*_2571fid   -260267ADYAMFKVEEEES-EEbbbxlxbb
1gkp_A_31gkp   A310LLIKNGEIEEEES-EEbbbbvxbx
1gq8_A_1441gq8   A145152QFFINCFIEEEES-EEbbbblbbb
1gq8_A_1641gq8   A165172VVLQDCDIEEEES-EEbbbblbbb
1gq8_A_1981gq8   A199206IVIQKSRIEEEES-EEbbbblbbb
1gq8_A_2321gq8   A233240TVVMQSSIEEEES-EEbbbblbbb
1h80_A_911h80   A9298YHFLGIQ.EEE-SEE.bbbbvxb.
1hg8_A_1391hg8   A139146SKITNLNIEEEES-EExbbbvbbb
1hg8_A_3451hg8   A348355FTFSGNAIEEEES-EExbbbvxbx
1hv9_A_3771hv9   A377384NIGAGTITEE-TT-EEbxpxvxbx
1ia5_A_1361ia5   A138145LTLKDITIEEEES-EEbbbblxbb
1ia5_A_1881ia5   A191198IYFSGGYCEEEES-EEbbbbvxbb
1ia5_A_241ia5   A2532IVLSNVAVEEEES-EEbbbblxbx
1idk_*_1881idk   -189196VSLTNNYIEEEES-EEbbbblxbx
1iz9_A_1781iz9   A178183..IRRMTV..EE--EE..xblxbb
1j3b_A_2941j3b   A294300.ILENVVV.EEES-EE.bbxvxxb
1jpc_*_81jpc   -916TLSTGEFLEE-TT-EEbbxpvxbb
1k0i_A_1191k0i   A119126TTVYQAAEEEESS-EExbbxlxxl
1k32_A_1321k32   A132138.RMFTDVA.EE-SEEE.bxxvbxa
1k5c_A_1621k5c   A162169VTIQNCIVEEEES-EEbbbbvxbb
1kbz_A_1461kbz   A149155FRTSWVY.EEE-SEE.bxbblxb.
1kcx_A_171kcx   A1724LLIRGGRIEEEES-EEbbbbvxbx
1lvl_*_2281lvl   -228235ALHLGHSVEEETT-EExbxxvxbx
1mo9_A_2711mo9   A271278EIISGSNVEEESS-EEbbbxlbbx
1mwp_A_921mwp   A9299VTIQNWCKEEE--EEEbxbbvxbb
1nc5_A_3241nc5   A324330FLVKDIC.EEE--EE.xbbxlxx.
1nhc_A_1941nhc   A196203VYISGATVEEEES-EEbbbbvxbb
1nhc_A_521nhc   A5360VVLSSIEVEEEES-EEbbbxlxxx
1o88_A_1131o88   A113120VVVQNMRIEEEES-EEbbbblbbb
1o88_A_1411o88   A141148VWVDHNELEEEES-EEbbbblbbb
1o88_A_2041o88   A205212ITYHHNYYEEEES-EEbbbbvxbb
1o88_A_2261o88   A227234VHAYNNLYEEEES-EEbbbblxbb
1o88_A_2491o88   A250257ALIENNWFEEEES-EEbbbblbbb
1ofm_A_1291ofm   A129135.RITACVF.EEES-EE.bbblbbb
1ofm_A_1611ofm   A161167.RIDHCSF.EEES-EE.bbblbbb
1ofm_A_1991ofm   A199205.RVDHCFF.EEES-EE.bbblbbb
1ofm_A_2311ofm   A231237.LVDSNLF.EEES-EE.bbblbbb
1ofm_A_2551ofm   A255261.VYYGNTY.EEES-EE.bbbvxbb
1ofm_A_2771ofm   A277283.VAINNFY.EEES-EE.bbblxbb
1ofm_A_3031ofm   A303309.VIACNYF.EEES-EE.bbblxbb
1ofm_A_3411ofm   A341347.LIANNAF.EEES-EE.bbblxbb
1ofm_A_3821ofm   A382388.MLKGNLF.EEES-EE.bbbvxbb
1ofm_A_4101ofm   A410416.SWTGNVA.EEES-EE.bbbvxbb
1ofm_A_521ofm   A5259GTYKDVQLEEEET-EEebbxvxbx
1ofm_A_961ofm   A96103LILEGIWFEEEES-EEbbbbvbbx
1ogm_X_3331ogm   X335342WYCVGPTIEEEES-EExbbbgpbb
1onw_A_101onw   A1017TLLQGAHLEEEES-EEbbxbvxxx
1os1_A_3091os1   A309315.LLENVTV.EEES-EE.bxbvxxb
1pe9_A_1141pe9   A116123VIIRNVYIEEEES-EEbbbblbbb
1pe9_A_1531pe9   A155162VWIDHVTIEEEES-EEbbbblbbb
1pe9_A_1941pe9   A196203VTISNSLIEEEES-EEbbbblbbb
1pe9_A_2271pe9   A228235VTLFNNVFEEEES-EEbbbblbbb
1pe9_A_2791pe9   A280287VLSEGNSFEEEES-EEbbbblxbb
1pe9_A_3081pe9   A309316FSDNGSVLEEEES-EEbbbbvxbb
1pe9_A_991pe9   A99105.KFINGSL.EEESSEE.bbbvbbx
1ps9_A_5891ps9   A589596KMIPGVSYEEE-S-EEbbbxvxbx
1qcx_A_1351qcx   A135142VIIQNIAVEEEES-EEbbbblbbb
1qcx_A_1871qcx   A189196VTISYSLIEEEES-EEbbbblbbb
1qcx_A_2211qcx   A223230VTLKGNYFEEEES-EEbbbblxbb
1qjv_A_1861qjv   A187194SFFSDCRIEEEES-EEbbbblbbb
1qjv_A_2441qjv   A244251LVITNSRVEEEES-EExbbblbbx
1qlw_A_431qlw   A4451TVTVDQMYEEEES-EEbbbbvxbx
1reo_A_2551reo   A255261.VHLNAQV.EESS-EE.bbxlbxx
1ru4_A_1651ru4   A165171.TFENTAF.EEES-EE.bbblbbb
1ru4_A_1891ru4   A189195.TVINSDA.EEES-EE.bbblbbb
1ru4_A_2221ru4   A222228.RFVGCRA.EEES-EE.bbbvxbb
1ru4_A_2461ru4   A246252.VIENSWA.EEES-EE.bbblbbb
1ru4_A_2841ru4   A284290.RITRSVA.EEES-EE.bbblbbb
1ru4_A_3081ru4   A308314.TVINNTS.EEES-EE.xbblbbb
1ru4_A_3331ru4   A333340HYFRNNVSEEEES-EExbbblxbb
1tol_A_131tol   A1522NSFTNVWKEEESS-EEbbbbvxbb
1trb_*_1991trb   -200207ILHTNRTLEEE-S-EEbxbxlbbx
1tyv_*_1891tyv   -189195.RIAGVFM.EEES-EE.bbbvpbx
1tyv_*_3481tyv   -348354.GVIGFTS.EEES-EE.ebbvbbb
4mdh_A_1774mdh   A177182..VKNVII..EE--EE..bblxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cqq_A_1301cqq   A     AG74-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE -3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER N - 130
1cqq_A_1301cqq   A     AG74-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE -3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER T - 132
1czf_A_1881czf   A     NAGN-ACETYL-D-GLUCOSAMINE G - 189
1czf_A_1881czf   A     NAGN-ACETYL-D-GLUCOSAMINE V - 190
1czf_A_1881czf   A     NAGN-ACETYL-D-GLUCOSAMINE N - 191
1czf_A_2091czf   A     NAGN-ACETYL-D-GLUCOSAMINE E - 210
1czf_A_2091czf   A     NAGN-ACETYL-D-GLUCOSAMINE N - 211
1czf_A_2091czf   A     NAGN-ACETYL-D-GLUCOSAMINE I - 212
1czf_A_2091czf   A     NAGN-ACETYL-D-GLUCOSAMINE W - 213
1f0l_A_121f0l   A     APUADENYLYL-3'-5'-PHOSPHO-URIDINE-3'-MONOPHOSPHATE Y - 20
1f0l_A_121f0l   A     APUADENYLYL-3'-5'-PHOSPHO-URIDINE-3'-MONOPHOSPHATE H - 21
1f0l_A_121f0l   A     APUADENYLYL-3'-5'-PHOSPHO-URIDINE-3'-MONOPHOSPHATE G - 22
1f0l_A_121f0l   A     APUADENYLYL-3'-5'-PHOSPHO-URIDINE-3'-MONOPHOSPHATE T - 23
1f8r_A_2551f8r   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 259
1f8r_A_2551f8r   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 260
1f8r_A_2551f8r   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 261
1f8r_A_2551f8r   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 262
1h80_A_911h80   A     CACALCIUM ION T - 91
1h80_A_911h80   A     CACALCIUM ION Y - 92
1h80_A_911h80   A     CACALCIUM ION H - 93
1hg8_A_1391hg8   A     NAGN-ACETYL-D-GLUCOSAMINE K - 140
1hv9_A_3771hv9   A     COCOBALT (II) ION N - 377
1hv9_A_3771hv9   A     COACOENZYME A N - 377
1hv9_A_3771hv9   A     COCOBALT (II) ION G - 379
1hv9_A_3771hv9   A     COACOENZYME A G - 379
1hv9_A_3771hv9   A     COCOBALT (II) ION A - 380
1hv9_A_3771hv9   A     COACOENZYME A A - 380
1hv9_A_3771hv9   A     COCOBALT (II) ION G - 381
1hv9_A_3771hv9   A     COCOBALT (II) ION I - 383
1ia5_A_241ia5   A     MANALPHA-D-MANNOSE T - 24
1ia5_A_241ia5   A     MANALPHA-D-MANNOSE I - 25
1ia5_A_241ia5   A     MANALPHA-D-MANNOSE V - 26
1ia5_A_241ia5   A     MANALPHA-D-MANNOSE S - 28
1ia5_A_1361ia5   A     MANALPHA-D-MANNOSE Y - 137
1ia5_A_1361ia5   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 137
1ia5_A_1881ia5   A     NAGN-ACETYL-D-GLUCOSAMINE E - 189
1ia5_A_1881ia5   A     NAGN-ACETYL-D-GLUCOSAMINE N - 190
1ia5_A_1881ia5   A     NAGN-ACETYL-D-GLUCOSAMINE I - 191
1ia5_A_1881ia5   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 192
1k0i_A_1191k0i   A     SO3SULFITE ION Y - 122
1k0i_A_1191k0i   A     SO3SULFITE ION Q - 123
1k0i_A_1191k0i   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 124
1k0i_A_1191k0i   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 127
1lvl_*_2281lvl   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE H - 233
1lvl_*_2281lvl   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 234
1lvl_*_2281lvl   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 235
1nhc_A_1941nhc   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 197
1ofm_A_1611ofm   A     GCUD-GLUCURONIC ACID R - 161
1ofm_A_1611ofm   A     GCUD-GLUCURONIC ACID H - 164
1ofm_A_1991ofm   A     MANALPHA-D-MANNOSE R - 199
1ofm_A_1991ofm   A     GCUD-GLUCURONIC ACID R - 199
1ofm_A_1991ofm   A     MANALPHA-D-MANNOSE D - 201
1ofm_A_1991ofm   A     GCUD-GLUCURONIC ACID D - 201
1ofm_A_1991ofm   A     MANALPHA-D-MANNOSE H - 202
1ofm_A_1991ofm   A     GCUD-GLUCURONIC ACID H - 202
1ofm_A_2311ofm   A     MANALPHA-D-MANNOSE D - 233
1ofm_A_2311ofm   A     GCUD-GLUCURONIC ACID D - 233
1ofm_A_2311ofm   A     MANALPHA-D-MANNOSE S - 234
1ofm_A_2311ofm   A     RAMRHAMNOSE S - 234
1ofm_A_2311ofm   A     GCUD-GLUCURONIC ACID S - 234
1ofm_A_2551ofm   A     MANALPHA-D-MANNOSE Y - 257
1ofm_A_2551ofm   A     RAMRHAMNOSE Y - 257
1ofm_A_2551ofm   A     GCUD-GLUCURONIC ACID Y - 257
1ofm_A_2551ofm   A     MANALPHA-D-MANNOSE G - 258
1ofm_A_2551ofm   A     RAMRHAMNOSE G - 258
1ofm_A_2551ofm   A     RAMRHAMNOSE N - 259
1ofm_A_2551ofm   A     RAMRHAMNOSE T - 260
1ofm_A_2771ofm   A     RAMRHAMNOSE N - 280
1ofm_A_2771ofm   A     RAMRHAMNOSE F - 282
1ps9_A_5891ps9   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Y - 596
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1f0l_A_121f0l   A CATREFERS TO CATALYTIC SITEH - 21
1ofm_A_1991ofm   A AC3GCU BINDING SITE FOR CHAIN AR - 199
1ofm_A_1991ofm   A AC1MAN BINDING SITE FOR CHAIN AH - 202
1ofm_A_2311ofm   A AC1MAN BINDING SITE FOR CHAIN AD - 233
1ofm_A_2311ofm   A AC1MAN BINDING SITE FOR CHAIN AS - 234
1ofm_A_2551ofm   A AC1MAN BINDING SITE FOR CHAIN AY - 257
1ofm_A_2551ofm   A AC2RAM BINDING SITE FOR CHAIN AG - 258
1ofm_A_2771ofm   A AC2RAM BINDING SITE FOR CHAIN AN - 280
1ofm_A_2771ofm   A AC2RAM BINDING SITE FOR CHAIN AF - 282

Clusters included in this Subclass
CLUSTER: AR.1.2
CLUSTER: AR.1.58
CLUSTER: AR.2.3
CLUSTER: AR.2.98
CLUSTER: AR.3.207
CLUSTER: AR.3.3