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Information on SUBCLASS 1.2.4
Subclass Accession number: 3656
Subclass: 1.2.4 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 27

Average sequence ID (%) : 9.2 +/- 15.8
Average RMSD (Å) : 0.596 +/- 0.158

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XXXXX
(φψ)-conformation: bbabp
Pattern: xx[adeknst][aegknqst]xxx
Conservation:0.357-0.5160.2721.381-1.4590.848-0.882
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1agi_*_701agi   -7278ISKSEFQEESS-EEbxabxbx
1g24_A_1661g24   A168174LEYGYISEESS-EEbbaxxbx
1g43_A_181g43   A1824SSNSIYAEES-EEEbbabbbb
1giq_A_3301giq   A332338TYPNFISEE-S-EEbbaxxbx
1gwi_A_2921gwi   A296302FAAEDVPEESS-EEbxabpbw
1hx0_A_4611hx0   A461467SCTGIKVEESS-EEbbabxbb
1hzd_A_1751hzd   A178184AIDGLALEESEEEEbxabpbb
1idk_*_411idk   -4450VLTKTFDEE-SEEEbbabxxx
1iwe_A_2911iwe   A298304VKAYTTREESSEEEbxabbbb
1izo_A_2921izo   A296302LVKKDFVEE-S-EEbxabpbb
1jae_*_4361jae   -436442SCTGKSVEESS-EEbxabxbb
1kqf_A_7001kqf   A700706YALEDLYEESS-EEbxabxbb
1mvq_A_1541mvq   A154160LQLTRVSEESS-EExbabxbb
1o65_A_361o65   A3743QVDGELMEE-SEEEpbabxbx
1odo_A_2921odo   A296302YAVTDIAEESS-EEbxabpbx
1ojq_A_1301ojq   A132138RENGYSSEESS-EEbbaxxbx
1p9b_A_2691p9b   A274280VKSYLTREESSEEEbxabbbb
1pkl_A_1601pkl   A164170TVTNSHTEE-S-EEbxabxbx
1qcx_A_411qcx   A4450ILDQTFDEE-SEEEbbabxbx
1qf5_A_2611qf5   A266272LKAYSTREESSEEEbxabbbb
1qs1_A_3781qs1   A380386EDKGYMSEESS-EEbbaxxbx
1rmg_*_721rmg   -7783QLDGIIYEE-SEEEbxabbbb
1rwr_A_1191rwr   A124130LTTGRPSEE-SEEEbbaxxwb
1srv_A_2131srv   A222227IVEKKV.EESSEE.bbaxxb.
1tyv_*_1661tyv   -168174ECKAKFIEE-SEEEbbabbbb
1un3_A_691un3   A7177ISKSSFQEESS-EEbxaxxbx
1uyr_A_17241uyr   A17271733LVTCRSVEESS-EEbxabpbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1giq_A_3301giq   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 332
1giq_A_3301giq   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 333
1giq_A_3301giq   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE P - 334
1giq_A_3301giq   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 335
1giq_A_3301giq   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE F - 336
1giq_A_3301giq   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 338
1giq_A_3301giq   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 339
1giq_A_3301giq   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 340
1gwi_A_2921gwi   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 292
1gwi_A_2921gwi   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 295
1hx0_A_4611hx0   A     EGLETHYLENE GLYCOL I - 465
1hx0_A_4611hx0   A     EGLETHYLENE GLYCOL K - 466
1hx0_A_4611hx0   A     EGLETHYLENE GLYCOL V - 467
1hx0_A_4611hx0   A     EGLETHYLENE GLYCOL Y - 468
1hx0_A_4611hx0   A     EGLETHYLENE GLYCOL V - 469
1iwe_A_2911iwe   A     ACTACETATE ION V - 297
1iwe_A_2911iwe   A     IMPINOSINIC ACID R - 304
1izo_A_2921izo   A     PAMPALMITOLEIC ACID F - 292
1izo_A_2921izo   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 293
1izo_A_2921izo   A     PAMPALMITOLEIC ACID L - 293
1odo_A_2921odo   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 292
1odo_A_2921odo   A     PIM4-PHENYL-1H-IMIDAZOLE L - 292
1p9b_A_2691p9b   A     GDPGUANOSINE-5'-DIPHOSPHATE V - 273
1p9b_A_2691p9b   A     GDPGUANOSINE-5'-DIPHOSPHATE K - 275
1p9b_A_2691p9b   A     IMO6-O-PHOSPHORYL INOSINE MONOPHOSPHATE R - 280
1qf5_A_2611qf5   A     GDPGUANOSINE-5'-DIPHOSPHATE I - 265
1qf5_A_2611qf5   A     GDPGUANOSINE-5'-DIPHOSPHATE K - 267
1qf5_A_2611qf5   A     RPL(C8-S)-HYDANTOCIDIN 5'-PHOSPHATE R - 272
1rmg_*_721rmg   *     NAGN-ACETYL-D-GLUCOSAMINE Y - 83
1rmg_*_721rmg   *     MANALPHA-D-MANNOSE Y - 83
1rmg_*_721rmg   *     NAGN-ACETYL-D-GLUCOSAMINE R - 84
1uyr_A_17241uyr   A     D1L2-[4-(2,4-DICHLOROPHENOXY)PHENOXY]PROPANOIC ACID V - 1733

Clusters included in this Subclass
CLUSTER: AR.1.25
CLUSTER: AR.2.15