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Information on SUBCLASS 1.2.7
Subclass Accession number: 3659
Subclass: 1.2.7 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 23

Average sequence ID (%) : 10.3 +/- 15.1
Average RMSD (Å) : 0.574 +/- 0.198

Consensus geometry
d (Å): 5 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XXppX
(φψ)-conformation: bbabb
Pattern: x[altv][deknrsy][adegnrst]xxx
Conservation:-1.0191.497-0.2500.928-0.766-0.9480.558
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aoz_A_2441aoz   A250256YTSDIDIEES-EEExbabbxb
1aqt_*_751aqt   -7985LADTAIREESSEEExxabbbx
1cbg_*_3501cbg   -352356ATFEH..EESEE..bbabb..
1g0u_2_1201g0u   2121127KLPYAIAEESEEEExbabbbb
1g0u_D_1571g0u   D159165RYNAKAIEESEEEEbbabbbb
1g0u_E_1561g0u   E159165ELYGTAIEESEEEExbabebb
1gtr_A_3441gtr   A344350AVIDPVKEESSEEEbbabxbx
1gw0_A_2551gw0   A261267TVDSLFLEES-EEExbabbxb
1gw0_A_4751gw0   A475481RRDTTMLEESEEEEbbabbxx
1gyc_A_2261gyc   A232238LVDSIQIEESBEEExbabbxb
1hfu_A_2251hfu   A231237TVDRLQIEESBEEEbbabbbb
1i5z_A_851i5z   A8793RAKTACEEESS-EEbxabxbb
1io1_A_2761io1   A277283DVKNVQVEESEEEEbbabxxb
1jj2_K_1191jj2   K121125IADDF..EESEE..bbabb..
1kid_*_2471kid   -250254IAEDV..EESEE..bbabb..
1kk1_A_2801kk1   A281285FVEEA..EESEE..xbabb..
1kv7_A_2621kv7   A269275KVSELPVEES-EEExbabbpb
1n7v_A_1411n7v   A142148NTAYKAEEESEEEExbabbxa
1nbf_A_3401nbf   A346352DYYDIQLEESSEEExbabbxb
1ne6_A_2121ne6   A214220KAKTNVKEESS-EEbxabxbb
1o7f_A_1261o7f   A128134VTRESSEEESSSEEbxabpbb
1q3e_A_5941q3e   A596602RADTYCREESS-EEbxaxxbb
1q3q_A_2331q3q   A233239RVENAKIEESSEEEbbaxpbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gw0_A_2551gw0   A     MANALPHA-D-MANNOSE V - 262
1gw0_A_2551gw0   A     O2OXYGEN MOLECULE D - 263
1gw0_A_2551gw0   A     MANALPHA-D-MANNOSE D - 263
1gw0_A_2551gw0   A     MANALPHA-D-MANNOSE S - 264
1gyc_A_2261gyc   A     NAGN-ACETYL-D-GLUCOSAMINE L - 232
1gyc_A_2261gyc   A     NAGN-ACETYL-D-GLUCOSAMINE D - 234
1i5z_A_851i5z   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE W - 85
1i5z_A_851i5z   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE V - 86
1ne6_A_2121ne6   A     SP16-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL T - 212
1ne6_A_2121ne6   A     SP16-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL V - 213
1q3e_A_5941q3e   A     PCGCYCLIC GUANOSINE MONOPHOSPHATE S - 594
1q3e_A_5941q3e   A     PCGCYCLIC GUANOSINE MONOPHOSPHATE V - 595
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gw0_A_2551gw0   A GC4MAN BINDING SITE FOR CHAIN BD - 263

Clusters included in this Subclass
CLUSTER: AR.1.18
CLUSTER: AR.2.29
CLUSTER: AR.3.84