Information on SUBCLASS 1.2.9 |
Subclass Accession number: 3661
Subclass: 1.2.9 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 21 Average sequence ID (%) : 21.0 +/- 24.7 Average RMSD (Å) : 0.448 +/- 0.229 Consensus geometry
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Consensus Sequence: | XXXpc |
(φψ)-conformation: | bbabg |
Pattern: | x | x | x | [adegknqst] | [adgn] | [ilmtv] | x | x |
Conservation: | -0.668 | -0.672 | -0.282 | 0.276 | 2.170 | 0.508 | -0.456 | -0.877 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c1e_L_154 | 1c1e | L | 154 | 161 | ERQNGVLN | EE-SSEEE | xbabvxbb |
1d2o_A_673 | 1d2o | A | 679 | 683 | LDEKA... | EESEE... | xxabb... |
1dj7_B_26 | 1dj7 | B | 26 | 33 | FDLQGMEG | EE-TT-EE | bxapgxbb |
1dyn_A_53 | 1dyn | A | 57 | 64 | LSVDNLKL | EE-TTEEE | bxaxvxbb |
1fng_A_126 | 1fng | A | 127 | 134 | PVTEGVSE | EE-SSEEE | pbabvbbb |
1hxr_A_62 | 1hxr | A | 64 | 71 | VLEEHWLV | EE--EEEE | xxabbbxb |
1i3r_B_162 | 1i3r | B | 163 | 170 | EEKTGIVS | EE-SSEEE | bxabvxbb |
1i4f_A_222 | 1i4f | A | 223 | 230 | DQTQDTEL | EE-TTEEE | pbaxlbbb |
1jk8_B_136 | 1jk8 | B | 137 | 144 | EETTGVVS | EE-SSEEE | xxaxvbbb |
1k2d_A_126 | 1k2d | A | 127 | 134 | SVADGVYE | EE-TTEEE | pbaxvbbb |
1kcv_L_153 | 1kcv | L | 154 | 161 | KRANGTAN | EE-TTEEE | xbaxvbbb |
1kgc_E_167 | 1kgc | E | 168 | 175 | EVHSGVST | EE-TTEEE | xbaxvbbb |
1mju_L_153 | 1mju | L | 154 | 161 | ERQNGVLN | EE-TTEEE | xbaxvbbb |
1oga_E_164 | 1oga | E | 165 | 172 | EVHSGVST | EE-SSEEE | xbabvbbb |
1q0x_L_153 | 1q0x | L | 154 | 161 | PVTAGMET | EE-TTEEE | pbaxvbbb |
1r53_A_64 | 1r53 | A | 64 | 70 | EIQSGTE. | EE-SSEE. | bxabvbb. |
1sat_*_146 | 1sat | - | 146 | 153 | QDLGGQTW | EE-TTEEE | bxapvxbb |
1uvq_A_129 | 1uvq | A | 130 | 137 | SVTEGVSE | EE-TTEEE | pbaxvbbb |
1uvq_B_136 | 1uvq | B | 137 | 144 | EETAGVVS | EE-TTEEE | xxaxvbbb |
7fab_L_149 | 7fab | L | 150 | 157 | PVKAGVET | EE-TTEEE | xbaxvxbb |
8fab_A_153 | 8fab | A | 154 | 161 | PIKAGVET | EE-TTEEE | wbaxvbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i3r_B_162 | 1i3r | B | NAGN-ACETYL-D-GLUCOSAMINE | V - 169 |
1k2d_A_126 | 1k2d | A | NAGN-ACETYL-D-GLUCOSAMINE | S - 127 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1uvq_A_129 | 1uvq | A | AC3FUC BINDING SITE FOR CHAIN B | Q - 129 |
1uvq_A_129 | 1uvq | A | AC3FUC BINDING SITE FOR CHAIN B | S - 130 |
Clusters included in this Subclass |
CLUSTER: AR.2.32 |
CLUSTER: AR.3.34 |