Logo
Information on SUBCLASS 1.2.11
Subclass Accession number: 3663
Subclass: 1.2.11 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 19

Average sequence ID (%) : 9.1 +/- 15.5
Average RMSD (Å) : 0.616 +/- 0.174

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XXpXh
(φψ)-conformation: bbabb
Pattern: xx[dekqrty]x[afgilmvy]x
Conservation:-0.1610.026-0.6560.5341.582-1.325
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1azz_A_811azz   A8489QSTDFTEE--EExbabbb
1b7y_B_1121b7y   B112117RSFGMAEE-SEExxabbx
1ckq_A_551ckq   A5762YRDSIKEES-EEbbabbx
1eu8_A_1141eu8   A114119KLYALPEE--EEbxabbx
1ew2_A_3501ew2   A355360TADHSHEES-EEbbabbb
1fl0_A_2221fl0   A222227LSQAMVEE--EExxabbx
1gd7_A_771gd7   A7883LSEVLVEE-SEExbabbx
1gqp_A_2461gqp   A246251HLRGIREES-EEbbabbb
1j79_A_3401j79   A340345TVRWSVEES-EExxabbx
1jy1_A_5061jy1   A506511KIAWFLEES-EEbbabbb
1jz7_A_1381jz7   A142147IFDGVNEES-EEbbabbb
1k0i_A_701k0i   A7176VHEGVEEES-EExbabbb
1k7h_A_3491k7h   A354359TADHGHEESSEEbbabxb
1ks9_A_1131ks9   A117122TTTHAAEE--EEbbaxbb
1ln1_A_1501ln1   A151156RVKQYKEE--EExxabbb
1qwy_A_2091qwy   A209214AHYGVDEE-SEExbabbb
1urs_A_1321urs   A132137TMYSVPEE-SEEbxabbw
3mbp_*_1023mbp   -102107KLIAYPEE-SEExxabxx
3thi_A_1043thi   A104109EVYGLPEE--EEbxabbp
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1eu8_A_1141eu8   A     TRETREHALOSE Y - 121
1eu8_A_1141eu8   A     TRETREHALOSE D - 123
1ew2_A_3501ew2   A     ZNZINC ION D - 357
1ew2_A_3501ew2   A     MGMAGNESIUM ION D - 357
1ew2_A_3501ew2   A     PO4PHOSPHATE ION D - 357
1ew2_A_3501ew2   A     ZNZINC ION H - 358
1ew2_A_3501ew2   A     PO4PHOSPHATE ION H - 358
1ew2_A_3501ew2   A     ZNZINC ION H - 360
1ew2_A_3501ew2   A     PO4PHOSPHATE ION H - 360
1jy1_A_5061jy1   A     MSESELENOMETHIONINE K - 506
1jy1_A_5061jy1   A     MSESELENOMETHIONINE I - 507
1jy1_A_5061jy1   A     MSESELENOMETHIONINE W - 509
1jy1_A_5061jy1   A     MSESELENOMETHIONINE F - 510
1jy1_A_5061jy1   A     MSESELENOMETHIONINE L - 511
1k7h_A_3491k7h   A     ZNZINC ION D - 356
1k7h_A_3491k7h   A     ZNZINC ION H - 357
1k7h_A_3491k7h   A     ZNZINC ION H - 359
1ln1_A_1501ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE Y - 155
1ln1_A_1501ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE Q - 157
1ln1_A_1501ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE L - 159
1ln1_A_1501ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE A - 160
1ln1_A_1501ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE I - 161
1qwy_A_2091qwy   A     ZNZINC ION H - 210
1qwy_A_2091qwy   A     ZNZINC ION G - 212
1qwy_A_2091qwy   A     ZNZINC ION V - 213
1qwy_A_2091qwy   A     ZNZINC ION D - 214
1urs_A_1321urs   A     MLRMALTOTRIOSE Q - 141
3mbp_*_1023mbp   *     GLCGLUCOSE E - 111
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
3thi_A_1043thi   A NUCCYS 113 IS THE ACTIVE SITE NUCLEOPHILE.C - 113

Clusters included in this Subclass
CLUSTER: AR.1.16
CLUSTER: AR.2.20