Logo
Information on SUBCLASS 1.3.1
Subclass Accession number: 3682
Subclass: 1.3.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 25

Average sequence ID (%) : 25.8 +/- 22.9
Average RMSD (Å) : 0.432 +/- 0.118

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XpGph
(φψ)-conformation: abebb
Pattern: x[aciltv]x[aekqst][G][cdeknrstwy][agilmvwy]x
Conservation:-0.5700.174-0.4700.0722.360-0.533-0.392-0.641
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a5d_A_1231a5d   A125132HVMEGYWVEEEES-EEbxabebbb
1a70_*_481a70   -5057KLKTGSLNEEEES-EEbxabebbb
1amm_*_341amm   -3643RVDSGCWMEEEES-EEbxabebbb
1awd_*_461awd   -4855KVESGEVDEEEES-EEbxabebbb
1czp_A_501czp   A5259KLVSGTVDEEEES-EEbxabebbb
1doi_*_721doi   -7481IVLEGDIDEEEES-EEbxabebbx
1frr_A_471frr   A4956KVVSGSVDEEEES-EEbxabebbb
1h2k_A_2031h2k   A208215AQIKGYKREEEES-EEbxabebbx
1h4a_X_1231h4a   X125132NVLEGSWVEEEES-EEbxabebbb
1ha4_A_1231ha4   A125132KVLEGVWIEEEES-EEbxabebbb
1i5z_A_381i5z   A4148YIVKGSVAEEEE--EEbxabebbb
1iue_A_481iue   A5057KLVEGEVDEEEES-EEbxabebbb
1j1l_A_1911j1l   A195202YTISGDVYEEEES-EEbxabebbb
1juh_A_2741juh   A277284QVQEGRVVEEEES-EEbxabebbx
1kk1_A_2331kk1   A237244SIVQGKLKEEEES-EEbxabebbb
1krh_A_501krh   A5259FCESGNYDEEEE--EEbxabexbb
1m8u_A_1231m8u   A125132HVLEGWWVEEEES-EEbxabexbb
1ne6_A_1711ne6   A174181VIDQGEMDEEEES-EEbxabebbb
1ne6_A_2891ne6   A292299IILEGSAAEEEE--EEbxabebbb
1o5l_A_301o5l   A3340ILLEGTLKEEEES-EEbxabebbb
1off_A_491off   A5158KITAGSVDEEEES-EEbxabebbb
1q3e_A_5531q3e   A556563FIQHGVVSEEEE--EEbxabebbb
1qxr_A_971qxr   A100107VALKGKGGEEEES-EEbxabebbb
1su4_A_2131su4   A213220NIAAGKALEEEE--EEbxabebbb
2pia_*_2812pia   -283290ALCSGEADEEEES-EExbabexxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a70_*_481a70   *     FESFE2/S2 (INORGANIC) CLUSTER A - 48
1awd_*_461awd   *     FESFE2/S2 (INORGANIC) CLUSTER A - 46
1czp_A_501czp   A     FESFE2/S2 (INORGANIC) CLUSTER A - 50
1doi_*_721doi   *     FESFE2/S2 (INORGANIC) CLUSTER A - 72
1frr_A_471frr   A     FESFE2/S2 (INORGANIC) CLUSTER L - 47
1h2k_A_2031h2k   A     FE2FE (II) ION N - 205
1h2k_A_2031h2k   A     OGAN-OXALYOLGLYCINE N - 205
1h2k_A_2031h2k   A     OGAN-OXALYOLGLYCINE F - 207
1h2k_A_2031h2k   A     OGAN-OXALYOLGLYCINE K - 214
1i5z_A_381i5z   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE T - 38
1i5z_A_381i5z   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE V - 49
1juh_A_2741juh   A     EDO1,2-ETHANEDIOL V - 278
1juh_A_2741juh   A     EDO1,2-ETHANEDIOL Q - 279
1juh_A_2741juh   A     EDO1,2-ETHANEDIOL E - 280
1juh_A_2741juh   A     EDO1,2-ETHANEDIOL G - 281
1juh_A_2741juh   A     EDO1,2-ETHANEDIOL R - 282
1krh_A_501krh   A     FESFE2/S2 (INORGANIC) CLUSTER R - 50
1ne6_A_1711ne6   A     SP16-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL V - 182
1ne6_A_1711ne6   A     SP16-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL V - 184
1ne6_A_2891ne6   A     SP16-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL E - 289
1ne6_A_2891ne6   A     SP16-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL V - 300
1ne6_A_2891ne6   A     SP16-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL Q - 302
1off_A_491off   A     FESFE2/S2 (INORGANIC) CLUSTER A - 49
1q3e_A_5531q3e   A     PCGCYCLIC GUANOSINE MONOPHOSPHATE K - 553
1q3e_A_5531q3e   A     PCGCYCLIC GUANOSINE MONOPHOSPHATE V - 564
1qxr_A_971qxr   A     NINICKEL (II) ION E - 97
1qxr_A_971qxr   A     PA55-PHOSPHOARABINONIC ACID E - 97
1qxr_A_971qxr   A     NINICKEL (II) ION Y - 99
1qxr_A_971qxr   A     PA55-PHOSPHOARABINONIC ACID Y - 99
2pia_*_2812pia   *     FESFE2/S2 (INORGANIC) CLUSTER K - 281
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h2k_A_2031h2k   A OGAOGA BINDING SITE FOR CHAIN AN - 205

Clusters included in this Subclass
CLUSTER: AR.2.23
CLUSTER: AR.3.19