Information on SUBCLASS 5.10.2 |
Subclass Accession number: 369
Subclass: 5.10.2 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.18 (>50 %) 1.18.6 (>50 %) 1.18.6.1 GO : GO:0005351 (>75 %) GO:0005386 (>75 %) GO:0015144 (>75 %) GO:0015290 (>75 %) GO:0015291 (>75 %) GO:0016163 (>50 %) GO:0016730 (>50 %) GO:0016732 (>50 %) GO:0030151 (>50 %) GO:0046914 (>50 %) GO:0051119 (>75 %) SCOP : 53799 (>50 %) 53807 (>50 %) 53816 (>50 %) 53821 (>75 %) 53822 (>75 %) 53823 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 24.5 +/- 19.1 Average RMSD (Å) : 0.750 +/- 0.173 Consensus geometry
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Consensus Sequence: | pXpPpXXXI |
(φψ)-conformation: | aabaapabb |
Pattern: | [LV] | x | [AKV] | [AIM] | x | [ANR] | x | [L] | [DNQT] | [ART] | [DHN] | [P] | [DENT] | [IKV] | [AKQS] | x | [IV] |
Conservation: | 0.501 | -0.940 | -0.620 | -0.231 | -0.903 | -0.374 | -0.644 | 1.241 | -0.385 | -0.405 | 0.491 | 3.015 | -0.238 | -0.389 | -0.459 | -0.664 | 1.005 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1drk_*_166 | 1drk | - | 170 | 186 | LNVMQNLLTAHPDVQAV | HHHHHHHHHH-TT--EE | aaaaaaaaaabaapabb |
1gud_A_177 | 1gud | A | 181 | 197 | LDVATNVLQRNPNIKAI | HHHHHHHHHH-TT--EE | aaaaaaaaaabaapabb |
1m32_A_119 | 1m32 | A | 119 | 135 | VQAIDAILNADPTISHI | HHHHHHHHHH-TT--EE | aaaaaaaaaabaaxabb |
1qg8_A_106 | 1qg8 | A | 107 | 123 | LLKMVRELDTHPEKAVI | HHHHHHHHHH-TT--EE | aaaaaaaaaabaaxabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gud_A_177 | 1gud | A | ZNZINC ION | D - 182 |
1gud_A_177 | 1gud | A | ZNZINC ION | N - 186 |
1m32_A_119 | 1m32 | A | MSESELENOMETHIONINE | I - 122 |
1m32_A_119 | 1m32 | A | MSESELENOMETHIONINE | I - 135 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gud_A_177 | 1gud | A | ZN1ZN BINDING SITE FOR CHAIN A | D - 182 |
Clusters included in this Subclass |
CLUSTER: HE.4.119 |