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Information on SUBCLASS 2.4.2
Subclass Accession number: 3713
Subclass: 2.4.2 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 13

Average sequence ID (%) : 13.1 +/- 26.1
Average RMSD (Å) : 0.800 +/- 0.147

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 225-270
Consensus Sequence: hXpXXX
(φψ)-conformation: bpapbb
Pattern: xxxxxxxx
Conservation:1.286-0.204-0.0721.442-1.432-1.0660.147-0.100
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1eje_A_411eje   A4451APFSFTMPEEE-SEEEbxbaxbbx
1i0r_A_231i0r   A2734QIANTVFQEEES-EEEbxbaxbbx
1jez_A_151jez   A1522LMPSIGFGEEESBEEExbpabbbx
1kfu_L_1491kfu   L153160VVDDRLPTEEE--EEEbbxaxbwb
1ktz_A_781ktz   A7885CVPQDLEPEEE--EEExbxaxbbx
1kxr_A_1581kxr   A163170VVDDLLPTEEES-EEEbbxaxbwb
1ln1_A_1501ln1   A150157IRVKQYKQEEE--EEExxxabbbb
1mdw_A_1481mdw   A153160VVDDRLPTEEES-EEEbbxaxbwb
1nbw_A_781nbw   A8491METITETIEEE-EEEEbbxabbbb
1tgj_*_781tgj   -7885CVPQDLEPEEE-SEEExbpabbbx
1usc_A_311usc   A3542CPAVWNTGEEESSEEEbxbaxbbx
2fok_A_2582fok   A259266EFISHAFKEEESSEEEbbbaxbbb
2tgi_*_782tgi   -7885CVSQDLEPEEE-SEEExbpabbbw
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1eje_A_411eje   A     NINICKEL (II) ION N - 42
1eje_A_411eje   A     FMNFLAVIN MONONUCLEOTIDE N - 42
1eje_A_411eje   A     NINICKEL (II) ION A - 43
1eje_A_411eje   A     FMNFLAVIN MONONUCLEOTIDE A - 43
1eje_A_411eje   A     NINICKEL (II) ION A - 44
1eje_A_411eje   A     FMNFLAVIN MONONUCLEOTIDE A - 44
1eje_A_411eje   A     FMNFLAVIN MONONUCLEOTIDE P - 45
1eje_A_411eje   A     FMNFLAVIN MONONUCLEOTIDE F - 46
1eje_A_411eje   A     FMNFLAVIN MONONUCLEOTIDE S - 47
1eje_A_411eje   A     FMNFLAVIN MONONUCLEOTIDE F - 48
1eje_A_411eje   A     FMNFLAVIN MONONUCLEOTIDE T - 49
1i0r_A_231i0r   A     FMNFLAVIN MONONUCLEOTIDE C - 25
1i0r_A_231i0r   A     FMNFLAVIN MONONUCLEOTIDE G - 26
1i0r_A_231i0r   A     FMNFLAVIN MONONUCLEOTIDE Q - 27
1i0r_A_231i0r   A     FMNFLAVIN MONONUCLEOTIDE I - 28
1i0r_A_231i0r   A     FMNFLAVIN MONONUCLEOTIDE A - 29
1i0r_A_231i0r   A     FMNFLAVIN MONONUCLEOTIDE N - 30
1i0r_A_231i0r   A     FMNFLAVIN MONONUCLEOTIDE T - 31
1i0r_A_231i0r   A     FMNFLAVIN MONONUCLEOTIDE V - 32
1ln1_A_1501ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE Y - 155
1ln1_A_1501ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE Q - 157
1ln1_A_1501ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE L - 159
1ln1_A_1501ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE A - 160
1ln1_A_1501ln1   A     DLP1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE I - 161
1tgj_*_781tgj   *     DIO1,4-DIETHYLENE DIOXIDE I - 88
1tgj_*_781tgj   *     DIO1,4-DIETHYLENE DIOXIDE Y - 90
1usc_A_311usc   A     FMNFLAVIN MONONUCLEOTIDE N - 33
1usc_A_311usc   A     FMNFLAVIN MONONUCLEOTIDE F - 34
1usc_A_311usc   A     FMNFLAVIN MONONUCLEOTIDE C - 35
1usc_A_311usc   A     FMNFLAVIN MONONUCLEOTIDE P - 36
1usc_A_311usc   A     FMNFLAVIN MONONUCLEOTIDE A - 37
1usc_A_311usc   A     FMNFLAVIN MONONUCLEOTIDE V - 38
1usc_A_311usc   A     ACTACETATE ION V - 38
1usc_A_311usc   A     FMNFLAVIN MONONUCLEOTIDE W - 39
1usc_A_311usc   A     ACTACETATE ION W - 39
1usc_A_311usc   A     FMNFLAVIN MONONUCLEOTIDE N - 40
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1usc_A_311usc   A AC1FMN BINDING SITE FOR CHAIN AN - 33
1usc_A_311usc   A AC1FMN BINDING SITE FOR CHAIN AC - 35
1usc_A_311usc   A AC1FMN BINDING SITE FOR CHAIN AP - 36
1usc_A_311usc   A AC1FMN BINDING SITE FOR CHAIN AW - 39

Clusters included in this Subclass
CLUSTER: AR.1.64
CLUSTER: AR.3.48