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Information on SUBCLASS 2.5.2
Subclass Accession number: 3717
Subclass: 2.5.2 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 15.7 +/- 18.5
Average RMSD (Å) : 0.833 +/- 0.132

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: hXXXXh
(φψ)-conformation: bblpbb
Pattern: xx[iltv][AGILY]x[agn][anq]x[AFIV][DEGNQST][DGKR][itv]xx
Conservation:-1.160-0.2650.666-0.149-1.3371.5070.093-0.6391.3350.1120.2361.611-1.303-0.707
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cf3_A_2421cf3   A242255LQVLTGQYVGKVLLEEEEES-EEEEEEEbbbbbvbxxabxxb
1ee6_A_1151ee6   A116129TINIRNFRADDIGKEEEEES-EEEEEEEbbbbblbbbbvbab
1gpe_A_2461gpe   A246259LEILTGQMVGKVLFEEEEES-EEEEEEEbbbbbvbbxabxxb
1ju2_A_2091ju2   A209222LRVGVHASVEKIIFEEEEES-EEEEEEEbbbbblbxxabxxb
1k5c_A_2071k5c   A210223NVVIKGNTVTRSMYEEEEES-EEEEEEElbbbbvxbbblbab
1k5c_A_2371k5c   A240253GVTYDANTISGIAKEEEEES-EEEEEEEvbbbbvxbbbvxaa
1pe9_A_2271pe9   A227240HVTLFNNVFNRVTEEEEEES-EEEEEEExbbbblbbbblbab
1qcx_A_2671qcx   A268281YVLAEGNVFQDVNVEEEEES-EEEEEEEbbbbbvxbbblbab
3lad_A_2363lad   A236249LKILLGARVTGTEVEEEEET-EEEEEEExbxbxvxbxabbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cf3_A_2421cf3   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 248
1cf3_A_2421cf3   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 249
1cf3_A_2421cf3   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 250
1cf3_A_2421cf3   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 251
1gpe_A_2461gpe   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 252
1gpe_A_2461gpe   A     FADFLAVIN-ADENINE DINUCLEOTIDE M - 253
1gpe_A_2461gpe   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 254
1gpe_A_2461gpe   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 255
1ju2_A_2091ju2   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 215
1ju2_A_2091ju2   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 216
1ju2_A_2091ju2   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 217
1ju2_A_2091ju2   A     FADFLAVIN-ADENINE DINUCLEOTIDE E - 218
1k5c_A_2371k5c   A     GOLGLYCEROL S - 261

Clusters included in this Subclass
CLUSTER: AR.1.39
CLUSTER: AR.2.58
CLUSTER: AR.3.69