Logo
Information on SUBCLASS 5.12.2
Subclass Accession number: 372
Subclass: 5.12.2 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>75 %)  2 (>75 %)  3 (>50 %)  
SCOP : 52140 (>50 %)  52141 (>50 %)  52142 (>50 %)  
Number of loops: 4

Average sequence ID (%) : 7.7 +/- 10.0
Average RMSD (Å) : 1.350 +/- 0.191

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XpXhXcXXX
(φψ)-conformation: aappplpbb
Pattern: xxx[DKST][GRST]xx[DG][AKS]xxxx
Conservation:0.448-1.214-0.4680.278-0.129-0.672-0.6722.7690.863-0.332-0.7390.064-0.197
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1azs_B_10221azs   B10301042MDSTGVLDKIQVTHHHT--TTEEEEEaaaaxbxlbbbbx
1cbf_*_591cbf   -6173LIAKSKPGAEVLKHHTTS-TT-EEEEaaaaxxpvpxbbx
1isp_A_1381isp   A138150NYLSRLDGARNVQHHHH--BTSEEEEaaaaxbxgxxxbx
1mgp_A_2341mgp   A245257LREDTPEGSKLRVHHTTS-TT-EEEEaaaabpxvxxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1mgp_A_2341mgp   A     PLMPALMITIC ACID I - 258
1mgp_A_2341mgp   A     MSESELENOMETHIONINE V - 260
1mgp_A_2341mgp   A     PLMPALMITIC ACID V - 260
1mgp_A_2341mgp   A     MSESELENOMETHIONINE H - 261

Clusters included in this Subclass
CLUSTER: HE.6.80