Logo
Information on SUBCLASS 3.1.6
Subclass Accession number: 3748
Subclass: 3.1.6 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 25

Average sequence ID (%) : 7.2 +/- 11.6
Average RMSD (Å) : 0.788 +/- 0.203

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XXpXXXX
(φψ)-conformation: bbabpbb
Pattern: xxx[dehknrsty]xxxxx
Conservation:-0.315-1.1170.5091.3650.9480.264-0.054-1.600-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1auk_*_3251auk   -325332GVTHELAS.EEE-S-EE.ebbaxxbb.
1bco_*_2651bco   -271278YLHNVFVR.EE-SB-EE.bxxabxbx.
1cpt_*_3981cpt   -401409VELSGPPRLEEESS--EEbbxabxpbx
1dj7_B_61dj7   B715VRVTSSVVVEEE-S--EEbbxaxxbxb
1eg7_A_15101eg7   A15111519ITVREVRLSEEE---EEEbbxabbbbb
1fsu_*_3421fsu   -342349VKNRELIH.EEE-S-EE.bbxaxxbb.
1hdh_A_4001hdh   A400406.ISHAFAT..EE---EE..bbaxxbb.
1hxr_A_371hxr   A3745LFSRRQLFLEEE---EEEbxbaxxbxb
1i52_A_1311i52   A135143APVRDTMKREE--S-EEEbxxaxxbbb
1j79_A_3111j79   A313320ELVREEQQ.EEE---EE.bbbabpbb.
1lfp_A_1961lfp   A201208WKPISTVQ.EEESS-EE.bbxabbbx.
1lwd_A_51lwd   A513IKVAKPVVEEE-SS-EEExxbabxbxb
1mda_L_511mda   L5159LVASGSWVGEE-S--EEEbxxaxbbxb
1ml9_A_441ml9   A4451RFIDHSII.EE-SS-EE.bxbabxxb.
1mwp_A_1031mwp   A104112QCKTHPHFVEEE---EEElxxaxwbbb
1mwp_A_821mwp   A8694VEANQPVTIEE-SS-EEEbxxabxbxb
1ocv_A_641ocv   A6573VELTQEVRAEEE-S--EEbbxabpxbb
1oh0_A_671oh0   A6876ACLTGPVRAEEESS--EEbbxabxxxb
1p42_A_31p42   A513KTVKEKLSFEEESS-EEEbbbabpbgb
1q5d_A_3901q5d   A390397.KLKETPVF.EE-S--EE.bxabpxxb
1qd6_C_331qd6   C3340.YPYDTNYL.EE-S--EE.bxaxxbbb
1qni_A_1401qni   A143150CNAEFVIP.EEE-S-EE.bbbabxbx.
2alr_*_122alr   -1219KMPLIGLG.EEESB-EE.xbpabbxx.
2hgs_A_502hgs   A5057.FTLFPSLV.EESS--EE.bxabxxxb
3cla_*_823cla   -8492IVWDSVDPQEEES--EEEbbxabbbwb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1lfp_A_1961lfp   A     MSESELENOMETHIONINE W - 201
1lfp_A_1961lfp   A     MSESELENOMETHIONINE K - 202
1lfp_A_1961lfp   A     MSESELENOMETHIONINE P - 203
1oh0_A_671oh0   A     EQUEQUILENIN A - 68
1p42_A_31p42   A     ZNZINC ION L - 3
1qd6_C_331qd6   C     HDS1-HEXADECANOSULFONIC ACID N - 38
1qd6_C_331qd6   C     HDS1-HEXADECANOSULFONIC ACID Y - 39
1qd6_C_331qd6   C     HDS1-HEXADECANOSULFONIC ACID L - 40
3cla_*_823cla   *     COCOBALT (II) ION D - 87
3cla_*_823cla   *     CLMCHLORAMPHENICOL Q - 92
3cla_*_823cla   *     CLMCHLORAMPHENICOL T - 94

Clusters included in this Subclass
CLUSTER: AR.3.32
CLUSTER: AR.4.39