Information on SUBCLASS 3.2.4 |
Subclass Accession number: 3769
Subclass: 3.2.4 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 25 Average sequence ID (%) : 13.6 +/- 16.6 Average RMSD (Å) : 0.484 +/- 0.253 Consensus geometry
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Consensus Sequence: | hXXpphp |
(φψ)-conformation: | bbaaabb |
Pattern: | x | [FHIVW] | [adnpqs] | x | [ehknpst] | x | [GIKLTV] | x | x | x |
Conservation: | -0.812 | 1.356 | -0.390 | -0.857 | 0.442 | -0.710 | 1.592 | -0.618 | -1.000 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bbz_A_44 | 1bbz | A | 47 | 55 | WVPSNYITP. | EEEGGGEEE. | xbxaaabbx. |
1cka_A_179 | 1cka | A | 181 | 188 | MIPVPYVE.. | EEEGGGEE.. | xbxaaabb.. |
1csk_A_57 | 1csk | A | 59 | 66 | IIPANYVQ.. | EEETTSEE.. | xbxaaabb.. |
1g38_A_404 | 1g38 | A | 404 | 412 | PVRREYGFH. | EE-TTTEEE. | wbxaaabbx. |
1g43_A_36 | 1g43 | A | 36 | 44 | .INLADLKLR | .EEGGGEEEE | .bxaaaxbbb |
1g8l_A_110 | 1g8l | A | 111 | 120 | VVMQEQTEQM | EEEGGGEEEE | bbxaaabbxb |
1gcq_A_201 | 1gcq | A | 204 | 212 | MFPRNYVTP. | EEEGGGEEE. | xbxaaabbx. |
1gcq_C_646 | 1gcq | C | 649 | 657 | WFPCNRVHP. | EEEGGGEEE. | bbxaaabbp. |
1hxr_A_113 | 1hxr | A | 114 | 122 | YVALERVSH. | EEEGGGEEE. | bbxaaabbb. |
1iq8_A_526 | 1iq8 | A | 526 | 534 | .VFAKFVIFA | .EEGGGEEEE | .bxaaaxabb |
1jb0_E_57 | 1jb0 | E | 59 | 67 | NFALHEVQE. | EE-GGGEEE. | bbxaaabbx. |
1jo8_A_46 | 1jo8 | A | 48 | 56 | LFPSNYVSL. | EEEGGGEEE. | xbxaaabbp. |
1ki1_B_1519 | 1ki1 | B | 1519 | 1527 | .IFLNEVLVK | .EEGGGEEEE | .xxaaabbbb |
1l1d_A_428 | 1l1d | A | 429 | 436 | LFSSADKY.. | EEEGGGEE.. | abbaaaxb.. |
1lck_A_108 | 1lck | A | 110 | 118 | FIPFNFVAK. | EEEGGGEEE. | xbxaaabbp. |
1mai_*_66 | 1mai | - | 66 | 75 | LFSIEDIQEV | EEEGGGEEEE | bbxaaababb |
1nba_A_191 | 1nba | A | 193 | 200 | IIPRETIG.. | EEEGGGEE.. | bbxaaabb.. |
1nbc_A_32 | 1nbc | A | 32 | 40 | .IDLSKLTLR | .EEGGGEEEE | .bxaaabbbb |
1ng2_A_271 | 1ng2 | A | 274 | 282 | YFPSMYLQK. | EEEGGGEEE. | xbxaaabbp. |
1ntv_A_104 | 1ntv | A | 107 | 116 | HHAVHEISYI | EE-GGGEEEE | bbxaaaxabb |
1p3r_A_112 | 1p3r | A | 115 | 124 | EHPVNKISFI | EE-GGGEEEE | bbxaaaxabb |
1p5t_A_48 | 1p5t | A | 53 | 62 | FWPYTLLRRY | EEEGGGEEEE | bbpaaaxabb |
1uj0_A_247 | 1uj0 | A | 250 | 257 | LFPSNFVT.. | EEEGGGEE.. | xbxaaabb.. |
1uz5_A_113 | 1uz5 | A | 114 | 123 | VIQFEDVERV | EEEGGGEEEE | bxpaaabbxb |
2mcm_*_81 | 2mcm | - | 85 | 94 | TVNCKVVSCS | EEETTTS-EE | xbbaaabxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g43_A_36 | 1g43 | A | CACALCIUM ION | Y - 47 |
1gcq_A_201 | 1gcq | A | MPD2-METHYL-2,4-PENTANEDIOL | Q - 201 |
1iq8_A_526 | 1iq8 | A | MGMAGNESIUM ION | A - 528 |
1iq8_A_526 | 1iq8 | A | MGMAGNESIUM ION | K - 529 |
1iq8_A_526 | 1iq8 | A | MGMAGNESIUM ION | F - 530 |
1iq8_A_526 | 1iq8 | A | MGMAGNESIUM ION | V - 531 |
1iq8_A_526 | 1iq8 | A | MGMAGNESIUM ION | I - 532 |
1jo8_A_46 | 1jo8 | A | SULSULFATE ANION | V - 54 |
1jo8_A_46 | 1jo8 | A | SULSULFATE ANION | S - 55 |
1jo8_A_46 | 1jo8 | A | SULSULFATE ANION | L - 56 |
1nbc_A_32 | 1nbc | A | CACALCIUM ION | Y - 43 |
1p5t_A_48 | 1p5t | A | MSESELENOMETHIONINE | G - 63 |
1uj0_A_247 | 1uj0 | A | PO4PHOSPHATE ION | V - 256 |
1uj0_A_247 | 1uj0 | A | PO4PHOSPHATE ION | T - 257 |
2mcm_*_81 | 2mcm | * | CACALCIUM ION | W - 83 |
2mcm_*_81 | 2mcm | * | MPD2-METHYL-2,4-PENTANEDIOL | S - 92 |
2mcm_*_81 | 2mcm | * | MPD2-METHYL-2,4-PENTANEDIOL | C - 93 |
2mcm_*_81 | 2mcm | * | MPD2-METHYL-2,4-PENTANEDIOL | S - 94 |
2mcm_*_81 | 2mcm | * | MPD2-METHYL-2,4-PENTANEDIOL | A - 95 |
2mcm_*_81 | 2mcm | * | MPD2-METHYL-2,4-PENTANEDIOL | G - 96 |
2mcm_*_81 | 2mcm | * | MPD2-METHYL-2,4-PENTANEDIOL | L - 97 |
2mcm_*_81 | 2mcm | * | MPD2-METHYL-2,4-PENTANEDIOL | G - 98 |
Clusters included in this Subclass |
CLUSTER: AR.2.42 |
CLUSTER: AR.4.24 |