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Information on SUBCLASS 3.2.8
Subclass Accession number: 3773
Subclass: 3.2.8 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 13.3 +/- 19.9
Average RMSD (Å) : 0.913 +/- 0.155

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: hXXXphp
(φψ)-conformation: bbaaabb
Pattern: [gqrs][amvy]x[GWY][dgnrs][ADEP][agknqs][knst][ACILV]xx
Conservation:-0.629-0.265-0.8862.525-0.5330.140-0.5740.1280.647-0.554-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1flj_A_471flj   A4858SVSYDPGSAKTEEE--GGGEEEbbbxxaaaxab
1hcb_*_471hcb   -4858SVSYNPATAKEEEE--GGGEEEbbbbbaaaxab
1hyo_A_1581hyo   A158168GYHGRASSIVVEEE--STTEEEbbxxxaaaxbx
1jr7_A_2391jr7   A240249VMRYIDQFVQ.EE---TTTEE.bbbbbaaaxb.
1keq_A_451keq   A4858RVSYDAASCRYEEE--GGGEEExbbbbaaaxab
1ocv_A_1091ocv   A113123RALWGEKNIHAEEE--GGGEEEbbbbbaaabbx
1oh0_A_1131oh0   A117126QAYWSEVNLS.EEE--GGGEE.bbxbbaaaxb.
1svb_*_1261svb   -129139GHVYDANKIVYEEE--TTT-EEbbbxbaaaxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1flj_A_471flj   A     GTTGLUTATHIONE W - 47
1flj_A_471flj   A     GTTGLUTATHIONE V - 49
1flj_A_471flj   A     GTTGLUTATHIONE Y - 51
1flj_A_471flj   A     GTTGLUTATHIONE P - 53
1hyo_A_1581hyo   A     CACALCIUM ION Y - 159
1hyo_A_1581hyo   A     HBU4-[HYDROXY-[METHYL-PHOSPHINOYL]]-3-OXO-BUTANOIC ACID Y - 159
1oh0_A_1131oh0   A     EQUEQUILENIN M - 116
1oh0_A_1131oh0   A     EQUEQUILENIN A - 118
1oh0_A_1131oh0   A     EQUEQUILENIN W - 120
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oh0_A_1131oh0   A AC1EQU BINDING SITE FOR CHAIN AM - 116
1oh0_A_1131oh0   A AC1EQU BINDING SITE FOR CHAIN AW - 120

Clusters included in this Subclass
CLUSTER: AR.4.121
CLUSTER: AR.5.110
CLUSTER: AR.6.60