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Information on SUBCLASS 3.5.3
Subclass Accession number: 3797
Subclass: 3.5.3 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 6.7 +/- 9.9
Average RMSD (Å) : 0.800 +/- 0.283

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: Xhpcpph
(φψ)-conformation: bbplpbb
Pattern: xx[agsv][EHRY][DGNQ][stv][kqty][ALVW]x
Conservation:-0.370-0.776-0.5341.3261.7190.246-0.4740.246-1.384
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1g97_A_3531g97   A353361SIGENTKAGEE-TT-EEEbbxpvxbba
1jj2_S_711jj2   S7280IHVEDVTLEEEETT-EEEbbbpvxbbx
1lm8_V_1061lm8   V110118HSYRGHLWLEEETT-EEEbbbpvxbbb
1qre_A_1141qre   A114122SLAHQSQVHEE-TT-EEEbbxpvxbbb
1ro2_A_1681ro2   A172180LQSYNSYVLEE-TT-EEEbxbpvbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1lm8_V_1061lm8   V     HYP4-HYDROXYPROLINE I - 109
1lm8_V_1061lm8   V     HYP4-HYDROXYPROLINE H - 110
1lm8_V_1061lm8   V     HYP4-HYDROXYPROLINE S - 111
1lm8_V_1061lm8   V     HYP4-HYDROXYPROLINE Y - 112
1lm8_V_1061lm8   V     HYP4-HYDROXYPROLINE H - 115
1lm8_V_1061lm8   V     HYP4-HYDROXYPROLINE W - 117
1qre_A_1141qre   A     OCNCOBALT ION, 2 WATERS COORDINATED Q - 120
1qre_A_1141qre   A     BCTBICARBONATE ION H - 122
1qre_A_1141qre   A     OCNCOBALT ION, 2 WATERS COORDINATED H - 122
1qre_A_1141qre   A     OCNCOBALT ION, 2 WATERS COORDINATED G - 123
1ro2_A_1681ro2   A     MNMANGANESE (II) ION Q - 173

Clusters included in this Subclass
CLUSTER: AR.3.149
CLUSTER: AR.4.241