Information on SUBCLASS 3.6.12 |
Subclass Accession number: 3813
Subclass: 3.6.12 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 56398 (>50 %) 56399 (>50 %) 56400 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 22.2 +/- 16.4 Average RMSD (Å) : 0.900 +/- 0.400 Consensus geometry
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Consensus Sequence: | hLXRcXX |
(φψ)-conformation: | bbpplpb |
Pattern: | [EKY] | [LV] | [ILV] | [L] | x | [R] | [GN] | [GIT] | x | [LY] | [AES] | [IPV] | x | [DSW] | [NV] |
Conservation: | -0.432 | 0.506 | 0.540 | 1.438 | -0.582 | 2.111 | 0.941 | -1.180 | -1.479 | 0.708 | -0.282 | -0.432 | -0.582 | -0.731 | -0.545 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1j7n_A_518 | 1j7n | A | 518 | 532 | KLILQRNIGLEIKDV | EEEE-SSEEEEEEEE | bbbxxxvxbbbxabb |
1od5_A_368 | 1od5 | A | 371 | 385 | YVVLYRNGIYSPHWN | EEEE-TT-EEEEEEE | bbbbxpvxbxppbbx |
1ojq_A_180 | 1ojq | A | 180 | 194 | EVLLPRGTEYAVGSV | EEEE-TTEEEEEEEE | xbxbpxvxbbbxabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1od5_A_368 | 1od5 | A | MGMAGNESIUM ION | Q - 370 |
1od5_A_368 | 1od5 | A | MGMAGNESIUM ION | V - 372 |
1od5_A_368 | 1od5 | A | MGMAGNESIUM ION | Y - 380 |
1od5_A_368 | 1od5 | A | MGMAGNESIUM ION | H - 383 |
1od5_A_368 | 1od5 | A | MGMAGNESIUM ION | N - 385 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1od5_A_368 | 1od5 | A | AC4MG BINDING SITE FOR CHAIN B | H - 383 |
Clusters included in this Subclass |
CLUSTER: AR.3.233 |