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Information on SUBCLASS 3.8.2
Subclass Accession number: 3821
Subclass: 3.8.2 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 9.4 +/- 16.3
Average RMSD (Å) : 0.912 +/- 0.083

Consensus geometry
d (Å): 19 delta (°): 0-45 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: hhphXXX
(φψ)-conformation: bbppabb
Pattern: xx[AFILVY][pvy][dhqst][lpvy]xxxxx
Conservation:-1.080-0.7441.9611.045-0.1290.022-1.0640.307-0.317-1.000-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b7y_B_5081b7y   B508516QEVYTYSFM..EE----SEE..xxbbbpaxb..
1dms_*_4181dms   -420430SKFPDVKMAYWEE-----EEEEbbxxxxabbbb
1eu1_A_4181eu1   A420430ATYPDVKLAYWEE-----EEEEbbxxxxabbbb
1g5h_A_991g5h   A100108FAVDSLHQE..EE----SEE..bxbbbxabb..
1h4v_B_371h4v   B3746LELVTPIFEE.EE----SEEE.xxbbxxabbx.
1hc7_A_641hc7   A6473QNAYFPLFIP.EE----SEEE.bxbbxpaxbp.
1m8u_A_771m8u   A7989RLIPHTSSHRLEE----S--EEbxxpxbabbbb
1poi_A_1601poi   A168178VPVPQVDVAIIEE----SEEEEbxxxbxabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dms_*_4181dms   *     PGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE W - 430
1dms_*_4181dms   *     PGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE V - 431
1eu1_A_4181eu1   A     GLCGLUCOSE Y - 422
1eu1_A_4181eu1   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE W - 430
1eu1_A_4181eu1   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE A - 431
1g5h_A_991g5h   A     MSESELENOMETHIONINE V - 99
1g5h_A_991g5h   A     GOLGLYCEROL D - 103
1g5h_A_991g5h   A     GOLGLYCEROL S - 104
1g5h_A_991g5h   A     GOLGLYCEROL L - 105
1g5h_A_991g5h   A     GOLGLYCEROL H - 106

Clusters included in this Subclass
CLUSTER: AR.5.87
CLUSTER: AR.6.48