Information on SUBCLASS 5.25.1 |
Subclass Accession number: 386
Subclass: 5.25.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.2 (>75 %) 3.2.2 (>75 %) 3.2.2.22 GO : GO:0016798 (>75 %) GO:0016799 (>75 %) GO:0030597 (>75 %) SCOP : 56370 (>75 %) 56371 (>75 %) 56372 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 11.8 +/- 12.4 Average RMSD (Å) : 0.900 +/- 0.173 Consensus geometry
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Consensus Sequence: | hXXhhXXph |
(φψ)-conformation: | aapplpabb |
Pattern: | [ILY] | [EHK] | [HKR] | [AVW] | [GL] | [AQS] | x | [AP] | [AG] | x | [ART] | [ER] | [APV] | [LVW] | [ILV] | [ALM] | [CT] |
Conservation: | -0.173 | 0.173 | 0.404 | -1.096 | -1.245 | -0.404 | -1.096 | 1.209 | 1.281 | -0.408 | -0.750 | 0.928 | -0.865 | -0.635 | 0.865 | -0.404 | 2.215 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cjw_A_135 | 1cjw | A | 144 | 160 | LHHVGAQPAVRRAVLMC | HHHHHTSTT--EEEEEE | aaaaaaxxNxabbbbbb |
1h7e_A_29 | 1h7e | A | 34 | 50 | YERALQVAGVAEVWVAT | HHHHHT-TT--EEEEEE | aaaaaaxxvbabbbbbb |
1jz7_A_520 | 1jz7 | A | 520 | 536 | IKKWLSLPGETRPLILC | HHHHHTSTT----EEEE | aaaaaappvxaxxbbxa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cjw_A_135 | 1cjw | A | COTCOA-S-ACETYL TRYPTAMINE | K - 135 |
1cjw_A_135 | 1cjw | A | COTCOA-S-ACETYL TRYPTAMINE | G - 136 |
1cjw_A_135 | 1cjw | A | COTCOA-S-ACETYL TRYPTAMINE | S - 137 |
1cjw_A_135 | 1cjw | A | COTCOA-S-ACETYL TRYPTAMINE | V - 138 |
1cjw_A_135 | 1cjw | A | COTCOA-S-ACETYL TRYPTAMINE | L - 158 |
1cjw_A_135 | 1cjw | A | COTCOA-S-ACETYL TRYPTAMINE | M - 159 |
1cjw_A_135 | 1cjw | A | COTCOA-S-ACETYL TRYPTAMINE | C - 160 |
1jz7_A_520 | 1jz7 | A | GALD-GALACTOSE | E - 537 |
Clusters included in this Subclass |
CLUSTER: HE.7.61 |