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Information on SUBCLASS 4.1.2
Subclass Accession number: 3874
Subclass: 4.1.2 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 29.8 +/- 24.0
Average RMSD (Å) : 0.575 +/- 0.282

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: hXpGpXGp
(φψ)-conformation: bbpgppba
Pattern: x[ilv][FIV][dhnpqr][EKQ][G][DEST]x[AG][ADEKT][EKNSTY][flmw]
Conservation:-0.943-0.2290.248-1.0100.6882.266-0.004-1.0631.214-0.571-0.6580.063
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cx4_A_1781cx4   A178189HVIDQGDDGDNFEEE-TTS---EExabbpgxxxabb
1i5z_A_281i5z   A2839TLIHQGEKAETLEEE-TTSB--EExabbpgxxxabb
1ne6_A_1611ne6   A161172TVIQQGDEGDNFEEE-TTS---EEbabbpgpxxabx
1ne6_A_2791ne6   A279290KIVVQGEPGDEFEEE-TTS---EExabbpgpwbabb
1o7f_A_3651o7f   A365376VLFNQGEEGTSWEEE-TTS---EExabbpvxxbNbb
1o7f_A_691o7f   A6980TLFRQGDIGTNWEEE-TTSB--EExabbpgxxxabb
1q3e_A_5431q3e   A543554YIIREGTIGKKMEEE-TTSB--EExabbxvxxxabb
1qs1_A_4021qs1   A406416LQVPKGSTGAY.EEE-TT-SEEE.bxbxpvxxbbx.
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cx4_A_1781cx4   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE I - 180
1cx4_A_1781cx4   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE G - 186
1cx4_A_1781cx4   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE N - 188
1i5z_A_281i5z   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE I - 30
1i5z_A_281i5z   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE A - 36
1i5z_A_281i5z   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE T - 38
1ne6_A_1611ne6   A     SP16-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL I - 163
1ne6_A_1611ne6   A     SP16-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL G - 169
1ne6_A_2791ne6   A     SP16-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL V - 281
1ne6_A_2791ne6   A     SP16-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL G - 287
1ne6_A_2791ne6   A     SP16-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL E - 289
1q3e_A_5431q3e   A     PCGCYCLIC GUANOSINE MONOPHOSPHATE I - 545
1q3e_A_5431q3e   A     PCGCYCLIC GUANOSINE MONOPHOSPHATE G - 551
1q3e_A_5431q3e   A     PCGCYCLIC GUANOSINE MONOPHOSPHATE K - 553

Clusters included in this Subclass
CLUSTER: AR.6.34