Logo
Information on SUBCLASS 4.2.3
Subclass Accession number: 3878
Subclass: 4.2.3 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 14

Average sequence ID (%) : 17.0 +/- 20.4
Average RMSD (Å) : 0.607 +/- 0.325

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: XhXXcpXh
(φψ)-conformation: bbpplpbb
Pattern: [afiltv]x[cgilv][aekqst][hkpqs][dgks][aekqrs]x[hilvy]x
Conservation:0.379-1.223-0.745-0.093-0.2791.9180.981-0.0290.456-1.367
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1acc_*_1061acc   -106115IRLEKGRLYQEEE-TT-EEEbxbxxvbxbx
1aoz_A_2061aoz   A206215FHVSPKKTYREEE-TT-EEExbbxplbbbx
1c5d_B_111c5d   B1119.LVQPSQTLS.EE-TTS-EE.bbxpgxbxb
1e30_A_631e30   A6473LEIPAGATVDEEE-TT-EEEbbbxxvxxbx
1gw0_A_2161gw0   A217226VTLTPGKRHREEE-TT-EEEbbxxpvbxbx
1gyc_A_1871gyc   A188197INVQHGKRYREEE-TT-EEEbxbbpvbbbx
1hfu_A_1861hfu   A187196VNVEQGKKYREEE-TT-EEEbxbbpvxbbx
1kya_A_1871kya   A188197ISVTPGKRYREEE-TT-EEEbxbbpvxbbx
1lml_*_5331lml   -533542TNCTPGLRVEEE--TT-EEEbpbxpgxbbx
1mda_H_571mda   H6271SLGAFLSLAVEEE-TT-EEEbbbFxlxbxb
1o54_A_231o54   A2635VDLEKDKKLHEE--TT-EEEbxxbpvxbbb
1q8i_A_2641q8i   A266275FAQAKGRLIIEEEBTTBEEEbxbbpvbxbb
1qht_A_2471qht   A249258AVEVKGRIHFEEE-TTSEEEbbbbpvbbxx
2plt_*_182plt   -1928LTIKSGETVNEEE-TT-EEEbbbxpvxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gw0_A_2161gw0   A     NAGN-ACETYL-D-GLUCOSAMINE N - 216
1gw0_A_2161gw0   A     NAGN-ACETYL-D-GLUCOSAMINE V - 217
1gw0_A_2161gw0   A     NAGN-ACETYL-D-GLUCOSAMINE T - 218
1gw0_A_2161gw0   A     NAGN-ACETYL-D-GLUCOSAMINE L - 227
2plt_*_182plt   *     CACALCIUM ION T - 18
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gw0_A_2161gw0   A BC6NAG BINDING SITE FOR CHAIN AN - 216
1gw0_A_2161gw0   A BC6NAG BINDING SITE FOR CHAIN AT - 218
1lml_*_5331lml   * CA3CARBOHYDRATE BINDING SITE.N - 534

Clusters included in this Subclass
CLUSTER: AR.5.24