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Information on SUBCLASS 4.2.4
Subclass Accession number: 3879
Subclass: 4.2.4 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 18.1 +/- 18.9
Average RMSD (Å) : 0.589 +/- 0.326

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 270-315
Consensus Sequence: XhhXcXXh
(φψ)-conformation: bbpplpbb
Pattern: x[GILVY][AEG]x[dgn][cgstv]x[FILTV]
Conservation:-0.7700.2111.322-0.8031.121-1.052-0.9110.882
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1czf_A_981czf   A100107TGASGHLIEE-TT-EEbbxpvxbb
1hhs_A_4881hhs   A489496SYEHGGAFEE-SS-EEbbxxvpbb
1hv9_A_3771hv9   A377384NIGAGTITEE-TT-EEbxpxvxbx
1hv9_A_4021hv9   A402409FVGSDTQLEE-TT-EEbxxpvxbb
1krr_A_1031krr   A103110LIAPNVTLEE-SS-EEbbxxlbbb
1mr7_A_611mr7   A6269KIGKFCSIEE-SS-EEbbxxlxbb
1mr7_A_681mr7   A6875SIGPGVTIEE-TT-EEbbxxvpbb
1odo_A_3081odo   A308315TIARGEPIEE-TT-EEbxxpvxxb
1ro2_A_1781ro2   A179186VLGLGSCVEE-TT-EEbxxpgxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hhs_A_4881hhs   A     MNMANGANESE (II) ION E - 491
1hhs_A_4881hhs   A     MNMANGANESE (II) ION G - 494
1hhs_A_4881hhs   A     MNMANGANESE (II) ION A - 495
1hhs_A_4881hhs   A     MNMANGANESE (II) ION F - 496
1hv9_A_3771hv9   A     COCOBALT (II) ION N - 377
1hv9_A_3771hv9   A     COACOENZYME A N - 377
1hv9_A_3771hv9   A     COCOBALT (II) ION G - 379
1hv9_A_3771hv9   A     COACOENZYME A G - 379
1hv9_A_3771hv9   A     COCOBALT (II) ION A - 380
1hv9_A_3771hv9   A     COACOENZYME A A - 380
1hv9_A_3771hv9   A     COCOBALT (II) ION G - 381
1hv9_A_3771hv9   A     COCOBALT (II) ION I - 383
1hv9_A_4021hv9   A     COCOBALT (II) ION F - 402
1hv9_A_4021hv9   A     COACOENZYME A F - 402
1hv9_A_4021hv9   A     COCOBALT (II) ION V - 403
1hv9_A_4021hv9   A     COACOENZYME A V - 403
1hv9_A_4021hv9   A     COCOBALT (II) ION G - 404
1hv9_A_4021hv9   A     COACOENZYME A G - 404
1hv9_A_4021hv9   A     COCOBALT (II) ION S - 405
1hv9_A_4021hv9   A     COACOENZYME A S - 405
1hv9_A_4021hv9   A     COCOBALT (II) ION D - 406
1hv9_A_4021hv9   A     COCOBALT (II) ION Q - 408
1krr_A_1031krr   A     ACOACETYL COENZYME *A I - 104
1krr_A_1031krr   A     ACOACETYL COENZYME *A A - 105
1krr_A_1031krr   A     ACOACETYL COENZYME *A P - 106
1krr_A_1031krr   A     ACOACETYL COENZYME *A S - 111
1odo_A_3081odo   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 317
1ro2_A_1781ro2   A     ZNZINC ION V - 186
1ro2_A_1781ro2   A     ZNZINC ION N - 187
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1hhs_A_4881hhs   A MN1MN BINDING SITE FOR CHAIN AE - 491
1hhs_A_4881hhs   A MN1MN BINDING SITE FOR CHAIN AA - 495

Clusters included in this Subclass
CLUSTER: AR.5.47