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Information on SUBCLASS 4.2.8
Subclass Accession number: 3883
Subclass: 4.2.8 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 11.1 +/- 14.0
Average RMSD (Å) : 0.875 +/- 0.222

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: phppcXph
(φψ)-conformation: bbpplpbb
Pattern: x[ALV]x[ACLV][AERS][AKT][DGN]x[KS][ILV]x[AITV]
Conservation:-0.3390.313-0.994-0.434-0.702-0.1370.995-1.2371.2812.121-0.612-0.255
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f42_A_2731f42   A275286TVICRKNASISVEEE--TT-EEEEbbbxbpvxbxbb
1i8k_A_101i8k   A1021SLSVATGEKVTIEEE--TT--EEEbbbbxpvxxbbb
1o54_A_231o54   A2536LVDLEKDKKLHTEEE--TT-EEEExbxxbpvxbbbb
1ofz_A_1991ofz   A205216SASASAGVSIAAEEE--TT-EEEEbbxbpxvxxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f42_A_2731f42   A     MNB5-MERCAPTO-2-NITRO-BENZOIC ACID S - 285
1f42_A_2731f42   A     MNB5-MERCAPTO-2-NITRO-BENZOIC ACID R - 287
1ofz_A_1991ofz   A     FULBETA-L-FUCOSE W - 199
1ofz_A_1991ofz   A     AFLALPHA-L-FUCOSE Y - 200
1ofz_A_1991ofz   A     AFLALPHA-L-FUCOSE V - 201
1ofz_A_1991ofz   A     AFLALPHA-L-FUCOSE G - 202
1ofz_A_1991ofz   A     AFLALPHA-L-FUCOSE G - 203
1ofz_A_1991ofz   A     AFLALPHA-L-FUCOSE F - 204
1ofz_A_1991ofz   A     FULBETA-L-FUCOSE W - 219
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ofz_A_1991ofz   A AC4AFL BINDING SITE FOR CHAIN AF - 204

Clusters included in this Subclass
CLUSTER: AR.6.99