Logo
Information on SUBCLASS 4.3.2
Subclass Accession number: 3887
Subclass: 4.3.2 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 23

Average sequence ID (%) : 9.6 +/- 14.3
Average RMSD (Å) : 0.670 +/- 0.199

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: hXXXpXhX
(φψ)-conformation: bbpabpbb
Pattern: x[afgilpvy]xx[adenpqst][ehknqrsty]xxx
Conservation:-1.000-0.768-0.8250.2461.0881.412-0.7960.768-1.126
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bco_*_2651bco   -270278GYLHNVFVREEE-SB-EEbbxxabxbx
1bd0_A_2691bd0   A269276.YTAQTEEW.EE--SSEE.bbxabpbx
1dlc_*_6051dlc   -606614LASFSTPFEEEE-SS-EEbbxxaxwbb
1dun_*_191dun   -2028DLCVPYDIMEEE-SS-EExbbxabxbb
1f7d_A_181f7d   A1927DLLAAKEIHEEE-SS-EExbbxabxbb
1gc5_A_1981gc5   A198205.VQAPRENR.EE-SS-EE.xbxabxbb
1ig8_A_1511ig8   A154162GFTFSFPASEEE--SSEEbbxbabxbb
1jj2_H_441jj2   H4755ELVVEKPVQEEEE-S-EEbxbxabxbb
1lml_*_1011lml   -101108.VRDVNWGA.EE-SS-EE.bbxaxxbx
1lns_A_6011lns   A604612DLELPSMLTEEE-SS-EExxxxabxbb
1lwd_A_51lwd   A512.IKVAKPVV.EE-SS-EE.xxbabxbx
1ml9_A_441ml9   A4451.RFIDHSII.EE-SS-EE.bxbabxxb
1mwp_A_821mwp   A8593VVEANQPVTEEE-SS-EEbbxxabxbx
1nr6_A_3651nr6   A365372.HAVTRDVR.EE-SS-EE.bbxabpbb
1p42_A_1301p42   A130137.FVVEEPII.EE--S-EE.xbxabwbb
1po5_A_3691po5   A369376.HTVTKDTQ.EE-SS-EE.bbxabpbx
1q5h_A_241q5h   A2634DLYSAYDYTEEE-SS-EExbbxabxbb
1qs1_A_1811qs1   A181189DIKFDSYLDEE--SS-EEbbxxabpxb
1six_A_271six   A2836DLYSAEDVEEEE-SS-EExxxxabxbb
1ua4_A_1901ua4   A190197.FEAPRENR.EE-SS-EE.xbxabxbb
1uyr_A_18871uyr   A18921900IGVETRTVEEEE--S-EEbbbxaxxxb
2sli_*_5002sli   -500508FKAFPTNYLEEE-SS-EEbbxxabxbb
3rp2_A_1483rp2   A148156DPTSYTLREEEE-SB-EEbwxxabpbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gc5_A_1981gc5   A     ADPADENOSINE-5'-DIPHOSPHATE R - 205
1nr6_A_3651nr6   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 365
1po5_A_3691po5   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 369
1q5h_A_241q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE D - 26
1six_A_271six   A     MGMAGNESIUM ION D - 28
1six_A_271six   A     DUP2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE D - 28
1ua4_A_1901ua4   A     AMPADENOSINE MONOPHOSPHATE R - 194
1ua4_A_1901ua4   A     AMPADENOSINE MONOPHOSPHATE E - 195
1ua4_A_1901ua4   A     AMPADENOSINE MONOPHOSPHATE N - 196
1ua4_A_1901ua4   A     GLCGLUCOSE R - 197
1ua4_A_1901ua4   A     AMPADENOSINE MONOPHOSPHATE R - 197
1ua4_A_1901ua4   A     GLCGLUCOSE I - 199
1ua4_A_1901ua4   A     GLCGLUCOSE S - 201

Clusters included in this Subclass
CLUSTER: AR.3.196
CLUSTER: AR.4.58
CLUSTER: AR.5.14
CLUSTER: AR.5.198