Information on SUBCLASS 4.4.2 |
Subclass Accession number: 3890
Subclass: 4.4.2 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 14.3 +/- 23.2 Average RMSD (Å) : 0.786 +/- 0.380 Consensus geometry
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Consensus Sequence: | hphXXhXX |
(φψ)-conformation: | bbaaapbb |
Pattern: | x | [dnsv] | x | [agst] | x | [altv] | [kpqt] | x | x |
Conservation: | -0.328 | 0.401 | -0.125 | 1.150 | -0.892 | 0.835 | 1.393 | -1.203 | -1.230 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fjr_A_11 | 1fjr | A | 11 | 18 | VDISAAQK. | EE-TTSEE. | bxaaaxxx. |
1m3k_A_111 | 1m3k | A | 117 | 125 | ESMSMAPHC | EESTT--EE | bbaaapxxb |
1nu6_A_222 | 1nu6 | A | 228 | 236 | FNDTEVPLI | EE-TT--EE | bbaaaxxbx |
1orv_A_222 | 1orv | A | 228 | 236 | FNDTEVPLI | EE-TTS-EE | bbaaaxxbx |
1pj5_A_501 | 1pj5 | A | 503 | 511 | YDMTPLKRL | EE-TTS-EE | bxaaaxpbb |
1uxz_A_39 | 1uxz | A | 40 | 48 | LSYAGTPVN | EE-TTS-EE | bbaaabxbx |
1v9e_A_46 | 1v9e | A | 48 | 56 | LVYGEATSR | EE-TT--EE | xxaaapbxa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1m3k_A_111 | 1m3k | A | GOLGLYCEROL | M - 119 |
1nu6_A_222 | 1nu6 | A | NAGN-ACETYL-D-GLUCOSAMINE | Q - 227 |
1nu6_A_222 | 1nu6 | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 229 |
1nu6_A_222 | 1nu6 | A | NAGN-ACETYL-D-GLUCOSAMINE | D - 230 |
1nu6_A_222 | 1nu6 | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 231 |
1nu6_A_222 | 1nu6 | A | NAGN-ACETYL-D-GLUCOSAMINE | E - 232 |
Clusters included in this Subclass |
CLUSTER: AR.4.117 |
CLUSTER: AR.5.88 |