Logo
Information on SUBCLASS 5.31.1
Subclass Accession number: 392
Subclass: 5.31.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.8 (>75 %)  1.8.1 (>75 %)  1.8.1.4
GO : GO:0003723 (>75 %)  GO:0004148 (>75 %)  GO:0005489 (>75 %)  GO:0015036 (>75 %)  GO:0016667 (>75 %)  GO:0016668 (>75 %)  GO:0030554 (>75 %)  GO:0048037 (>75 %)  GO:0050660 (>75 %)  GO:0050662 (>75 %)  
SCOP : 55423 (>75 %)  55424 (>75 %)  55425 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 2.8 +/- 5.7
Average RMSD (Å) : 0.700 +/- 0.100

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XppXphhpX
(φψ)-conformation: aapaappbb
Pattern: [EKW][DEP]xx[EKS][DNQ]x[EKS][AIY][ALY][KTY]x
Conservation:0.0861.2670.231-0.7570.9301.436-0.4200.930-0.588-0.588-0.588-1.938
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1kfs_A_3981kfs   A406417KPLLEDEKALKVHHHHT-TTS-EEaaaaaxaaxxbb
1mqi_A_1241mqi   A125136EDLSKQTEIAYGHHHHT-SSSEEEaaaaabaaxxbb
1q4g_A_1391q4g   A139150WESFSNVSYYTRHHHHH-TTB-EEaaaaaxaaxxxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1q4g_A_1391q4g   A     GOLGLYCEROL W - 139
1q4g_A_1391q4g   A     NAGN-ACETYL-D-GLUCOSAMINE E - 140
1q4g_A_1391q4g   A     GOLGLYCEROL E - 140
1q4g_A_1391q4g   A     GOLGLYCEROL S - 143
1q4g_A_1391q4g   A     NAGN-ACETYL-D-GLUCOSAMINE N - 144
1q4g_A_1391q4g   A     NAGN-ACETYL-D-GLUCOSAMINE S - 146
1q4g_A_1391q4g   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 147
1q4g_A_1391q4g   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 148

Clusters included in this Subclass
CLUSTER: HE.6.136