Information on SUBCLASS 4.47.1 |
Subclass Accession number: 3979
Subclass: 4.47.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 18.2 +/- 14.8 Average RMSD (Å) : 1.033 +/- 0.551 Consensus geometry
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Consensus Sequence: | hhpXpGph |
(φψ)-conformation: | bblppebb |
Pattern: | [AET] | [FGY] | [ILY] | [NQ] | [CSV] | [NQS] | [G] | [STY] | [AM] | x | [FHI] |
Conservation: | -0.609 | -0.380 | -0.228 | 0.788 | -0.685 | -0.076 | 2.744 | -0.609 | -0.104 | -0.232 | -0.609 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f5j_A_171 | 1f5j | A | 180 | 190 | EGYQSSGSANI | EEESS-EEEEE | bbblbbebbbx |
1ofm_A_260 | 1ofm | A | 260 | 270 | TYLNCQGTMNF | EEES-SSEEEE | bbblxxebxbx |
1ofm_A_346 | 1ofm | A | 346 | 356 | AFINVNGYAIH | EEES-SSEEEE | bbblxxexabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ofm_A_260 | 1ofm | A | RAMRHAMNOSE | T - 260 |
1ofm_A_260 | 1ofm | A | NGLACETYLGALACTOSAMINE-4-SULFATE | N - 269 |
1ofm_A_260 | 1ofm | A | NGLACETYLGALACTOSAMINE-4-SULFATE | R - 271 |
1ofm_A_260 | 1ofm | A | NGLACETYLGALACTOSAMINE-4-SULFATE | H - 272 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1ofm_A_260 | 1ofm | A | AC8NGL BINDING SITE FOR CHAIN A | R - 271 |
Clusters included in this Subclass |
CLUSTER: AR.3.261 |