Information on SUBCLASS 5.5.1 |
Subclass Accession number: 3999
Subclass: 5.5.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 13.9 +/- 19.9 Average RMSD (Å) : 0.480 +/- 0.162 Consensus geometry
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Consensus Sequence: | hphXpXppX |
(φψ)-conformation: | bbaaapabb |
Pattern: | x | x | [ilv] | [DENPQRS] | [aflpv] | x | [DEHK] | x | x | [eknqsty] | x |
Conservation: | -1.000 | -1.000 | 1.547 | 0.026 | -1.271 | -0.631 | 1.663 | 0.157 | -0.619 | -0.292 | -0.579 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ciy_*_470 | 1ciy | - | 471 | 481 | TQIPLTKSTNL | EEEEGGG-SEE | xbbxaaaxabx |
1dlc_*_509 | 1dlc | - | 510 | 520 | TQLPLVKAYKL | EEEEGGG-SEE | bxbxaaaxabb |
1h30_A_651 | 1h30 | A | 651 | 661 | RLLDLDEAAYK | EE--GGGSSEE | bxxbaaaxabb |
1i5p_A_493 | 1i5p | A | 494 | 504 | FTISPIHATQV | EEE-TTS-SEE | bbbxaaaxabb |
1ji6_A_512 | 1ji6 | A | 513 | 523 | TQLPVVKAYAL | EEEEGGG-SEE | bxbxaaaxabb |
1od3_A_29 | 1od3 | A | 29 | 37 | ..IQAEDYDSS | ..EETT--SEE | ..bxaaaxabb |
1okq_A_3097 | 1okq | A | 3097 | 3107 | LEVNFAKALEL | EE--GGG-SEE | bxxbaaaxabb |
1ug9_A_68 | 1ug9 | A | 68 | 77 | .AQRESEQTTR | .EEEGGG-SEE | .bbbaaaxabb |
1uxx_X_7 | 1uxx | X | 7 | 15 | ..IESEEYNSL | ..EEGGG-SEE | ..bxaaaxabb |
1uxz_A_2 | 1uxz | A | 4 | 14 | ATIQAEDHSQQ | EEEEGGG-SEE | bbbxaaaxabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h30_A_651 | 1h30 | A | CACALCIUM ION | D - 654 |
1h30_A_651 | 1h30 | A | CACALCIUM ION | D - 656 |
1od3_A_29 | 1od3 | A | CACALCIUM ION | Q - 30 |
1od3_A_29 | 1od3 | A | CACALCIUM ION | A - 31 |
1od3_A_29 | 1od3 | A | BGCBETA-D-GLUCOSE | E - 32 |
1od3_A_29 | 1od3 | A | CACALCIUM ION | E - 32 |
1od3_A_29 | 1od3 | A | BGCBETA-D-GLUCOSE | D - 33 |
1od3_A_29 | 1od3 | A | BGCBETA-D-GLUCOSE | Y - 34 |
1od3_A_29 | 1od3 | A | BGCBETA-D-GLUCOSE | D - 35 |
1od3_A_29 | 1od3 | A | BGCBETA-D-GLUCOSE | S - 36 |
1uxx_X_7 | 1uxx | X | CACALCIUM ION | E - 8 |
1uxx_X_7 | 1uxx | X | CACALCIUM ION | S - 9 |
1uxx_X_7 | 1uxx | X | CACALCIUM ION | E - 10 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h30_A_651 | 1h30 | A | CAACA BINDING SITE FOR CHAIN A | D - 656 |
1od3_A_29 | 1od3 | A | AC4CA BINDING SITE FOR CHAIN A | Q - 30 |
1od3_A_29 | 1od3 | A | AC4CA BINDING SITE FOR CHAIN A | E - 32 |
1od3_A_29 | 1od3 | A | AC5BGC BINDING SITE FOR CHAIN A | D - 33 |
1od3_A_29 | 1od3 | A | AC5BGC BINDING SITE FOR CHAIN A | Y - 34 |
1uxx_X_7 | 1uxx | X | AC1CA BINDING SITE FOR CHAIN X | E - 8 |
1uxx_X_7 | 1uxx | X | AC1CA BINDING SITE FOR CHAIN X | E - 10 |
Clusters included in this Subclass |
CLUSTER: AR.5.65 |
CLUSTER: AR.6.32 |
CLUSTER: AR.7.99 |