Information on SUBCLASS 5.5.2 |
Subclass Accession number: 4000
Subclass: 5.5.2 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 10.9 +/- 14.0 Average RMSD (Å) : 0.967 +/- 0.314 Consensus geometry
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Consensus Sequence: | hXhpphpXh |
(φψ)-conformation: | bbaaapabb |
Pattern: | [ACILW] | [dnps] | [FGL] | [HKST] | [EKNR] | [civy] | [DHKRSY] | [aknr] | [AIVWY] | [aqt] | [aefkl] |
Conservation: | -0.331 | -0.600 | 0.520 | 0.870 | 2.370 | -0.028 | -0.471 | -0.489 | -0.021 | -0.291 | -1.529 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eaz_A_233 | 1eaz | A | 235 | 245 | IPLKEVHKVQE | EEGGG--EEEE | bxaaaxabbbp |
1fao_A_206 | 1fao | A | 208 | 218 | LDLTECSAVQF | EEGGG--EEEE | bbaaaxabbbx |
1g5b_A_4 | 1g5b | A | 7 | 17 | IDGSKYRNIWV | EEGGG-S-EEE | bxaaababbbb |
1j7n_A_111 | 1j7n | A | 112 | 122 | ALLHEHYVYAK | EEGGG-SEEEE | bbaaaxabbbx |
1m3y_A_369 | 1m3y | A | 369 | 379 | CNFSRIDNATL | EETTS-S-EEE | bxaaaxabbbb |
1mix_A_347 | 1mix | A | 351 | 361 | WSLTNIKRWAA | EEGGG--EEEE | bxaaaxabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1eaz_A_233 | 1eaz | A | CITCITRIC ACID | R - 233 |
1fao_A_206 | 1fao | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | R - 206 |
1m3y_A_369 | 1m3y | A | HGMERCURY (II) ION | C - 369 |
1m3y_A_369 | 1m3y | A | HGMERCURY (II) ION | N - 370 |
1m3y_A_369 | 1m3y | A | HGMERCURY (II) ION | F - 371 |
1m3y_A_369 | 1m3y | A | HGMERCURY (II) ION | I - 374 |
PDB Site Annotated loops in this subclass |
Clusters included in this Subclass |
CLUSTER: AR.5.187 |
CLUSTER: AR.5.235 |
CLUSTER: AR.6.104 |