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Information on SUBCLASS 5.20.1
Subclass Accession number: 4023
Subclass: 5.20.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 41.2 +/- 26.9
Average RMSD (Å) : 0.412 +/- 0.146

Consensus geometry
d (Å): 17 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XWchXpGpX
(φψ)-conformation: pbppbplbp
Pattern: [AKNRS][T][aktv][KPRS][FW][ADGNQ][lmv][adq][NST][G][AEKQ]x[AGV][EKNT][AIV][hlv][IV]x[FY][DN]
Conservation:-0.5461.278-0.864-0.6662.286-0.618-0.475-0.8140.2541.747-0.323-1.046-0.473-0.460-0.140-0.8970.634-0.9601.4410.642
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1g7y_A_1501g7y   A150169RTASWGLANGQNAEILITYNEEEE----TTSEEEEEEEEEbbbxbxxxpvbpbxbbbbbb
1gzc_A_1541gzc   A154173KTQPFQLDNGQVANVVIKYDEEEE----TT-EEEEEEEEEbbbwbxxbpvxxbbbbbbbb
1h9w_A_361h9w   A3655STARWNMQTGKVGTAHISYNEEEE----TTSEEEEEEEEEbbbpbxpbpvbxbbbbbbbb
1len_A_1481len   A148167NTKSWNLQNGERANVVIAFNEEEE----TT-EEEEEEEEEbbbpbxpbpvxxbbbbbbbb
1loe_A_1481loe   A148167NTKSWALQNGKEANVVIAFNEEEE----TT-EEEEEEEEEbbbxbbpbpvxxbbbbbbbb
1mvq_A_361mvq   A3655ATTRWDVQNGKVGTAHISYNEEEE----TT-EEEEEEEEEbbbpbxxbpvbxbbbbbbbb
1nls_*_361nls   -3655KTAKWNMQNGKVGTAHIIYNEEEE----TT-EEEEEEEEEbbbxbxxbxvbxbbbbbbbb
1v6i_A_1491v6i   A149168KTVPWNSVSGAVVKVTVIYDEEEE----TT-EEEEEEEEEbbbwbbxxpvxxbbbbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1g7y_A_1501g7y   A     MNMANGANESE (II) ION T - 151
1gzc_A_1541gzc   A     MNMANGANESE (II) ION T - 155
1h9w_A_361h9w   A     MNMANGANESE (II) ION T - 37
1len_A_1481len   A     MNMANGANESE (II) ION T - 149
1v6i_A_1491v6i   A     MNMANGANESE (II) ION T - 150

Clusters included in this Subclass
CLUSTER: AR.6.33