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Information on SUBCLASS 5.30.1
Subclass Accession number: 4034
Subclass: 5.30.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 30.7 +/- 23.4
Average RMSD (Å) : 0.440 +/- 0.114

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: VThcXpGXh
(φψ)-conformation: bbppaalbb
Pattern: [DSTV][FV][LT][ATV][DGS][AS]x[G]x[AIV][PST][AFTV][PQS][CFLM]
Conservation:-0.8340.3080.587-0.1360.0460.504-0.7132.996-1.084-0.122-0.117-0.846-0.221-0.366
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dqt_A_81dqt   A821VVLASSHGVASFPCEEE--TTS-EEEEEbbxxxaavbbbbxb
1j48_A_491j48   A5063SFTTDASGAASFSFEEE--TTS-EEEEEbbbbxaavbbbbxb
1noa_*_531noa   -5467SVTADANGSASTSLEEE--TTS-EEEEEbbbxxaavbbbbbb
2mcm_*_522mcm   -5366DVTADAAGKITAQLEEE--TTS-EEEEEbbxxxaavbbbbxb
7taa_*_4417taa   -442455TVTVGSDGNVPVPMEEE--TTS-EEEEEbbbxxaavxbwxwb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
2mcm_*_522mcm   *     MPD2-METHYL-2,4-PENTANEDIOL T - 52
2mcm_*_522mcm   *     MPD2-METHYL-2,4-PENTANEDIOL Q - 65
2mcm_*_522mcm   *     MPD2-METHYL-2,4-PENTANEDIOL L - 66
2mcm_*_522mcm   *     MPD2-METHYL-2,4-PENTANEDIOL K - 67
2mcm_*_522mcm   *     MPD2-METHYL-2,4-PENTANEDIOL V - 68

Clusters included in this Subclass
CLUSTER: AR.7.45