Information on SUBCLASS 5.37.1 |
Subclass Accession number: 4041
Subclass: 5.37.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 62.5 +/- 16.0 Average RMSD (Å) : 0.250 +/- 0.058 Consensus geometry
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Consensus Sequence: | hcApphhDN |
(φψ)-conformation: | bbpapppbb |
Pattern: | [R] | [Y] | [DS] | [FV] | [V] | [IL] | [DEN] | [A] | [NS] | [QR] | [APT] | [PV] | [DG] | [N] | [Y] | [W] | [FI] | [NR] | [AV] | [NQT] |
Conservation: | 0.521 | 1.357 | -0.560 | -0.653 | 0.104 | -0.306 | -0.412 | 0.104 | -0.243 | -0.299 | -1.019 | -0.892 | -0.429 | 0.939 | 1.357 | 3.027 | -0.560 | -0.426 | -0.716 | -0.895 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gw0_A_272 | 1gw0 | A | 272 | 291 | RYDVVIDASRAPDNYWFNVT | EEEEEEE--S-SSEEEEEEE | bbxbbbbxaxxpbbbxxbbb |
1gyc_A_243 | 1gyc | A | 243 | 262 | RYSFVLNANQTVGNYWIRAN | EEEEEEE--S-SSEEEEEEE | bbbbxbxxaxxpbbbxbbbx |
1hfu_A_242 | 1hfu | A | 242 | 261 | RYSFVLDANQPVDNYWIRAQ | EEEEEEE--S-SSEEEEEEE | bbxbxbxxabppbbbxxbbx |
1kya_A_243 | 1kya | A | 243 | 262 | RYSFVLEANQAVDNYWIRAN | EEEEEEE--S-SSEEEEEEE | bbbbxbbxaxppbbbxbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gw0_A_272 | 1gw0 | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 285 |
1gw0_A_272 | 1gw0 | A | NAGN-ACETYL-D-GLUCOSAMINE | W - 287 |
1gw0_A_272 | 1gw0 | A | NAGN-ACETYL-D-GLUCOSAMINE | F - 288 |
1gw0_A_272 | 1gw0 | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 289 |
1gw0_A_272 | 1gw0 | A | NAGN-ACETYL-D-GLUCOSAMINE | V - 290 |
1gw0_A_272 | 1gw0 | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 291 |
1gyc_A_243 | 1gyc | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 249 |
1gyc_A_243 | 1gyc | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 251 |
1gyc_A_243 | 1gyc | A | NAGN-ACETYL-D-GLUCOSAMINE | Q - 252 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gw0_A_272 | 1gw0 | A | BC9NAG BINDING SITE FOR CHAIN A | W - 287 |
1gw0_A_272 | 1gw0 | A | BC9NAG BINDING SITE FOR CHAIN A | N - 289 |
1gyc_A_243 | 1gyc | A | NA4NAG BINDING SITE FOR CHAIN A | N - 249 |
1gyc_A_243 | 1gyc | A | NA4NAG BINDING SITE FOR CHAIN A | N - 251 |
Clusters included in this Subclass |
CLUSTER: AR.5.146 |