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Information on SUBCLASS 5.37.1
Subclass Accession number: 4041
Subclass: 5.37.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 62.5 +/- 16.0
Average RMSD (Å) : 0.250 +/- 0.058

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: hcApphhDN
(φψ)-conformation: bbpapppbb
Pattern: [R][Y][DS][FV][V][IL][DEN][A][NS][QR][APT][PV][DG][N][Y][W][FI][NR][AV][NQT]
Conservation:0.5211.357-0.560-0.6530.104-0.306-0.4120.104-0.243-0.299-1.019-0.892-0.4290.9391.3573.027-0.560-0.426-0.716-0.895
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gw0_A_2721gw0   A272291RYDVVIDASRAPDNYWFNVTEEEEEEE--S-SSEEEEEEEbbxbbbbxaxxpbbbxxbbb
1gyc_A_2431gyc   A243262RYSFVLNANQTVGNYWIRANEEEEEEE--S-SSEEEEEEEbbbbxbxxaxxpbbbxbbbx
1hfu_A_2421hfu   A242261RYSFVLDANQPVDNYWIRAQEEEEEEE--S-SSEEEEEEEbbxbxbxxabppbbbxxbbx
1kya_A_2431kya   A243262RYSFVLEANQAVDNYWIRANEEEEEEE--S-SSEEEEEEEbbbbxbbxaxppbbbxbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gw0_A_2721gw0   A     NAGN-ACETYL-D-GLUCOSAMINE N - 285
1gw0_A_2721gw0   A     NAGN-ACETYL-D-GLUCOSAMINE W - 287
1gw0_A_2721gw0   A     NAGN-ACETYL-D-GLUCOSAMINE F - 288
1gw0_A_2721gw0   A     NAGN-ACETYL-D-GLUCOSAMINE N - 289
1gw0_A_2721gw0   A     NAGN-ACETYL-D-GLUCOSAMINE V - 290
1gw0_A_2721gw0   A     NAGN-ACETYL-D-GLUCOSAMINE T - 291
1gyc_A_2431gyc   A     NAGN-ACETYL-D-GLUCOSAMINE N - 249
1gyc_A_2431gyc   A     NAGN-ACETYL-D-GLUCOSAMINE N - 251
1gyc_A_2431gyc   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 252
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gw0_A_2721gw0   A BC9NAG BINDING SITE FOR CHAIN AW - 287
1gw0_A_2721gw0   A BC9NAG BINDING SITE FOR CHAIN AN - 289
1gyc_A_2431gyc   A NA4NAG BINDING SITE FOR CHAIN AN - 249
1gyc_A_2431gyc   A NA4NAG BINDING SITE FOR CHAIN AN - 251

Clusters included in this Subclass
CLUSTER: AR.5.146