Information on SUBCLASS 5.41.1 |
Subclass Accession number: 4045
Subclass: 5.41.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 20.8 +/- 23.3 Average RMSD (Å) : 0.475 +/- 0.096 Consensus geometry
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Consensus Sequence: | phpphXXhp |
(φψ)-conformation: | bbpalpabb |
Pattern: | x | [IL] | [DET] | [NQT] | x | [AS] | [DEP] | [AIWY] | [ST] | x | x | [GITV] |
Conservation: | -1.145 | 1.428 | 0.373 | 0.347 | -0.535 | 1.031 | 0.525 | -0.912 | 1.475 | -1.112 | -0.273 | -1.203 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a1v_A_258 | 1a1v | A | 258 | 269 | TITTGSPITYST | EE----SEEEEE | bbxavxaxbbbx |
1g0h_A_68 | 1g0h | A | 69 | 80 | VIDNSSEWTVVI | EE----SEEEEE | bxxavpabbxbb |
1l0l_B_34 | 1l0l | B | 37 | 48 | SLENYAPASRIG | EE----SEEEEE | bbxalxabbbbb |
1vdw_A_71 | 1vdw | A | 72 | 83 | RIDQGSDYTVVV | EE--S-SEEEEE | bxxalxabbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g0h_A_68 | 1g0h | A | CACALCIUM ION | D - 81 |
1g0h_A_68 | 1g0h | A | IPDD-MYO-INOSITOL-1-PHOSPHATE | D - 81 |
1g0h_A_68 | 1g0h | A | CACALCIUM ION | P - 82 |
1g0h_A_68 | 1g0h | A | CACALCIUM ION | I - 83 |
1g0h_A_68 | 1g0h | A | IPDD-MYO-INOSITOL-1-PHOSPHATE | I - 83 |
1g0h_A_68 | 1g0h | A | CACALCIUM ION | D - 84 |
1g0h_A_68 | 1g0h | A | IPDD-MYO-INOSITOL-1-PHOSPHATE | D - 84 |
1vdw_A_71 | 1vdw | A | EGLETHYLENE GLYCOL | D - 84 |
1vdw_A_71 | 1vdw | A | EGLETHYLENE GLYCOL | D - 87 |
Clusters included in this Subclass |
CLUSTER: AR.4.149 |