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Information on SUBCLASS 5.80.1
Subclass Accession number: 4084
Subclass: 5.80.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 8.3 +/- 0.0
Average RMSD (Å) : 1.100 +/- 0.000

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: phIXpXXXX
(φψ)-conformation: _bppaapb_
Pattern: [RT][AI][I][EP][KS]xx[HI][GT][VW][AW][SV]
Conservation:0.095-0.4762.3820.6670.381-1.620-0.476-0.476-0.1910.3810.381-1.048
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gpm_A_1461gpm   A148159TAIPSDFITVASEE--TT-EEEEEabxwaabbxabb
1vk6_A_31vk6   A314RIIEKLDHGWWVEE--TT-EEEEEbxxbaapbebbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1vk6_A_31vk6   A     MSESELENOMETHIONINE R - 3
1vk6_A_31vk6   A     MPD2-METHYL-2,4-PENTANEDIOL R - 3
1vk6_A_31vk6   A     MSESELENOMETHIONINE V - 15
1vk6_A_31vk6   A     MSESELENOMETHIONINE S - 16
1vk6_A_31vk6   A     MSESELENOMETHIONINE H - 17

Clusters included in this Subclass
CLUSTER: AR.6.228